Solea senegalensis (Senegalese sole): 122769820
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Entry
122769820 CDS
T07721
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssen03036
]
122769820 (smarcad1a)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122769820 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
HDA2-3
DEAD
HHH_3
Motif
Other DBs
NCBI-GeneID:
122769820
NCBI-ProteinID:
XP_043882609
LinkDB
All DBs
Position
LG5:complement(8892352..8903780)
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AA seq
1076 aa
AA seq
DB search
MSLFNLDRFRFDKKAASSANKGEDGGSKSPESEKENKPAKMKSVRGPPKPRGVVFEEVDI
EDDEVPSEPKTKLTQLASKRKFKNPVVKSSNKVSHHVDDEDSELEAKIDRLLEMFPQLRR
AELLEVIEDTSTMDGAVAACLLKFGDKGEEQSRKRKVDGSGSSQDSGVAQPSKKRKSSVA
SADNDDDDDDDDDEDEDDDEDKEPSWEKREAMVKRLQKKFPDQDKEELRLVLQEHNWNAE
EALQVLQMFSEPDNSSFSSPESEEEKSSKSKSKDKSSRKHKELGQHKDHRHGVGRNDPGH
SNELEPLSESDFNSGDDTETTKDSEDESDQNESKGFKNNNRCSTQTTWLETSSHSVSSSS
SVKNISTSAKPSSSSANMLSRFASGTSIAKTQAAESKRKARASHEHVIISEGEDDDEEDT
VSSEFDDSDNEPDSESAMTEIKREVLKFFQDASTDELSLISGCSVKKAQKIVELRPFDSW
KALAEVFHKDNGLSEDLLLGCRLVLKERKVVLGLMSKCETISSKMVQRVTRVMETGSGVA
KQPSLLNSQLQMKPYQLIGLKWLLLLHEHKLSAILADEMGLGKTIQAIAFLAQLYENGIE
GPHLITVPSSTLDNWVRELKLWCPTLGVLVYYGSVEDRRYLRYDILSGKTDFNVIVTTYN
LAIGNDNDRSLFRKLNLKYAVFDEGHMLKNMNTLRYRHLMAINAEHRLLLTGTPLQNNLL
ELISLLNFIMPSMFSSSTTQLSKMFSMKSHEESRFERDRISQAKLIMKPFILRRVKSEVL
KQLPVKEEKVEFCSMSEKQQVLYDSLFKKLKDSTSGANRELCNVMMQLRKMANHPLLHRQ
YYTTDKLKAMSKLMLKEPTHNDADAALIQEDMEVMSDFELHRLCQQYYSITSYQLDTELL
LDSGKFHYLTELLGSLKNKGDRVVLFSQFTMMLDIVEVLLRHLKHRYVRLDGSTPIADRI
VLIDEFNTDPDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQSR
TVKVIKLISKDSIEDCILQLGQKKLKLEKDMTATDQDGQATITEDMASLLKASLGL
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgttcaatttggaccgttttcgtttcgacaaaaaggcggcgtcgtcagctaac
aaaggcgaagacggcggctctaagagtccagaatcggagaaggagaacaagccagccaag
atgaaatctgtcagaggcccaccgaagcccagaggagtagtttttgaggaagttgacata
gaggatgatgaggtcccctcagaaccaaagactaaattgactcaattagcctccaaaagg
aaattcaagaatccagttgtgaaatcatcaaataaggtatcgcatcatgtggatgatgag
gacagtgaattggaggctaagattgacaggcttctcgagatgtttcctcagttaaggagg
gcagagcttctagaggtcattgaagacacaagcacaatggatggagccgtagctgcctgt
cttttgaagtttggtgataaaggagaagaacaaagccggaagagaaaggtggatggatct
ggaagctctcaggacagtggagttgctcaacctagcaaaaagaggaaatcatcagttgcc
tctgctgataatgatgatgatgatgatgatgacgatgacgaagatgaagacgacgatgaa
gataaagagccaagctgggagaagcgggaggccatggtgaagagactgcagaaaaagttt
cctgaccaagacaaggaggagctgcggctggtgctgcaggaacacaactggaatgctgaa
gaagctctgcaggttctgcagatgttttctgaaccagataatagcagctttagctctcct
gagtctgaagaagagaaatcaagtaaatcaaagagcaaagacaaatcaagtaggaagcac
aaagagttggggcaacacaaagatcacagacacggtgtagggcggaatgatcctggacac
tccaatgaacttgaacccctcagtgaatcagattttaacagtggagacgacacagaaact
acaaaagacagtgaagatgaatctgaccaaaatgaaagcaaaggtttcaaaaataataat
agatgttccactcagactacatggcttgaaacaagttctcactcagtgtcttcctcctct
tctgtgaagaatatatctacctcagcgaagccctcatcctcttctgccaatatgttgtcc
agatttgccagtgggaccagtatagctaagacgcaagcagcagagagcaagagaaaggca
cgagcctcacatgaacatgttattatttctgagggggaagacgatgacgaagaggacacc
gttagcagcgagtttgacgactcggacaatgagccagactctgaaagtgccatgaccgaa
attaagagggaagtgctgaagtttttccaggacgcatcaacagacgagttgtccctgatc
tctgggtgttctgtcaaaaaggcccagaaaattgtggaactgagacccttcgatagctgg
aaagccttggctgaagtctttcataaagataacggactctctgaggacttactccttggc
tgcagacttgtcctcaaagagcggaaggttgtcttggggctcatgtccaaatgtgagacc
atttcctcaaaaatggtccaacgggtgacgcgggtgatggagacgggcagtggggtcgcg
aaacagcccagcttactgaacagccagttgcagatgaaaccttatcagctgattggtctg
aagtggctgctccttctgcatgagcacaaactgagtgccatccttgctgatgaaatgggt
ttgggcaaaactattcaggctatagcgtttctggcccagctgtatgagaatggaatagag
ggtcctcatctcatcactgtgccttcatctacactggataactgggtgagagagctgaag
ctgtggtgtccgaccctcggtgttctagtctattatggatctgtggaagatcgccgctac
ctcagatatgacatcctctctggcaagactgacttcaacgtcatagtgaccacgtacaac
ttggctataggaaacgacaacgatcgcagccttttccgcaagctgaatctgaagtatgcc
gtctttgacgagggtcatatgctgaaaaacatgaacactctacgctaccgccacctcatg
gccattaatgcagagcatcgcttgctgctgacaggaactcctttacagaacaacctcttg
gagctgatatcgctcctgaactttatcatgccctctatgttctccagctccaccacacag
ctctccaaaatgttttctatgaaatcccatgaggagagccgttttgagagggatcgcatt
tctcaggccaaacttatcatgaaaccatttatcctccgaagagtcaagagcgaggtccta
aagcagctgccagtaaaagaggagaaggtggagttctgttcaatgagtgagaaacagcag
gtgctgtatgactctctctttaaaaaactcaaggattccaccagtggtgcaaaccgcgag
ttgtgtaacgtgatgatgcagctgaggaaaatggcaaaccatccgttgcttcatagacag
tactacaccacagataagcttaaagccatgagcaaactcatgctcaaggagccaactcac
aacgatgcagatgctgctctgatccaggaggacatggaggtgatgtcggactttgagctg
catcgtctgtgtcagcagtactactccatcacctcctaccagctagacacggagctcctg
ctcgactctgggaaatttcactacctcacggagctgctgggctctctcaaaaacaaggga
gacagagtggtgttatttagtcagttcaccatgatgctggacatcgtggaagtgctcctc
agacatctcaagcaccgttacgtccgactggatggatccacacccatagctgacaggatt
gtgttgattgatgagttcaacacggaccctgacatatttgtgttcctgctgtcaacgcga
gctggaggcctgggcatcaatctcacctcggctaacgttgtcattctgcacgacatcgac
tgcaatccctacaacgacaaacaggcagaggacaggtgtcaccgtgtcggccagtccaga
actgtaaaggtgatcaagttgataagtaaggacagcatagaggactgcattctgcagctg
ggccagaagaagctcaagcttgagaaggacatgacggctactgaccaagatgggcaggcg
accataactgaagatatggcatctttgctcaaagcgtcactgggattgtga
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