Solea senegalensis (Senegalese sole): 122772964
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Entry
122772964 CDS
T07721
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122772964 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122772964 (exosc5)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122772964 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
122772964
NCBI-ProteinID:
XP_043887234
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All DBs
Position
LG8:complement(6794392..6797934)
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AA seq
219 aa
AA seq
DB search
MEACNTSDVTLRAFGCEHNLLSRPDGSASFVQGDTSVYAAVYGPAEVKVSKEIYDRATLE
VLIQPKVGLPSVRERSQEQCVRETCEASLLLSLHPRSSLTLVLQVLHDDGSLLSCFLNAA
CMALMDAGLPMSCLFCGVTCAISADGQIITDPTAAQEKESRALMTFAVDSRERKVLMSTT
KGSFSVHELQQCIAVSQKASEKMFQFYRDSVKRRYSKNL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgtgcaacacttcagatgtgactctgagagcgtttggctgtgaacacaactta
ctttctcgacccgatggttcagcgtctttcgtccaaggagacacgagtgtgtatgctgca
gtgtacggaccagctgaggtcaaagtcagcaaagagatctatgaccgggcgacattggag
gtgttgatacagcctaaagtgggattaccaagtgtaagggagcgatcgcaggagcagtgt
gtgcgagaaacctgcgaggcatctctgctcctgtcacttcaccctcgctcctccctcacc
ctcgttcttcaggtgttgcacgatgatggctcgctcttgtcttgctttttgaacgcagcc
tgtatggcgctcatggatgccggtctgcctatgagctgcctcttctgtggagtgacgtgt
gccatcagtgcagacggtcagatcatcacagaccccactgctgctcaggaaaaggaaagt
cgagctttgatgacctttgcagttgacagcagagaacgcaaagtactgatgtcgacaacc
aaaggatcattttcagtccacgagctgcagcagtgcatagcagtcagccagaaagcatca
gagaagatgttccagttttaccgggactctgtcaaacggcgatactccaaaaacctctga
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