Solea senegalensis (Senegalese sole): 122776983
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Entry
122776983 CDS
T07721
Symbol
cacna1fb
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1F subunit isoform X1
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04010
MAPK signaling pathway
ssen04020
Calcium signaling pathway
ssen04260
Cardiac muscle contraction
ssen04261
Adrenergic signaling in cardiomyocytes
ssen04270
Vascular smooth muscle contraction
ssen04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122776983 (cacna1fb)
04020 Calcium signaling pathway
122776983 (cacna1fb)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
122776983 (cacna1fb)
09153 Circulatory system
04260 Cardiac muscle contraction
122776983 (cacna1fb)
04261 Adrenergic signaling in cardiomyocytes
122776983 (cacna1fb)
04270 Vascular smooth muscle contraction
122776983 (cacna1fb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssen04040
]
122776983 (cacna1fb)
Ion channels [BR:
ssen04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122776983 (cacna1fb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
122776983
NCBI-ProteinID:
XP_043893774
LinkDB
All DBs
Position
LG11:complement(24188584..24211578)
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AA seq
2087 aa
AA seq
DB search
MYEESRRSVGRNGYANAVDGDEGGGDGEQEEEGGEGDGEGGGGGGEKRDTEWDEELDGEN
EGGVGMTRTDTLHSTTSSTGTQRRRGQHGKKQVQGSNQVQRAPRALYCLKLNNPIRRAAL
SIVEWKPFDVFILLAIFANCVALGVSKPFPEDDSNSTNHDLEQVEYIFLIIFTVETFLKI
LAYGLFMHPSSYIRNGWNLLDFVIVIVGLFSVVLETMTHKSGEQATTHHMPGKPGGLDVK
ALRAFRVLRPLRLVSGVPSLQIVLNSIMKAMVPLLHIALLVLFVIIIYAIIGLELFIGRM
HRTCYYTATNMYVEDDPVPCAFAGHGRQCVVNGSECRGGWDGPNGGITNFDNFFFAMLTV
FQCITMEGWTDVLYWMNDAIGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAK
ARGDFQKLREKQQMEEDLCGYMDWITQAEDMDELDEDGHSHPSLRDLSDKKRGKFGWFSH
SNDTHASLPASETASENTVNIDEEHTNCCQACCVQMMKIRCCRKLRRWNRVFRRNCRTAV
KSVTFYWVVLLLVFLNTSLSASEHYDQPDWLTQVQDIANKVLLSLFTVEMLLKMYSLGLA
HYFVAFFNRFDCFVVCGGIVETILVELDIMPPLGISVLRCVRLLRIFKVTRHWTALSNLV
ASLLNSMKSIASLLLLLFLFLIIFALLGMQLFGGKFNFDETQTKRSTFDSFPQALLTCFQ
ILTGEDWNVVMYDGIMAYGGPVFPGMIVCVYFVILFICGNYILLNVFLAIAVDNLAGGDG
DDKKKEKKEGAEEEEGVEEEEAEEGEVKVCLHVNIDEDTEYEEEEEPEEEEEGLHEGDDD
GGVQLKMADLTPPKEKVLPIPEGSAFFCLSKTNPIRVGCHTLIHHHIFTNLILVFIILSS
CSLAAEDPIRAHSFRNNILGYADYAFTSIFTVEILLKMTVHGAFLHQGSFCRNWFNLLDL
LVVSVSLVSFFLHSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMI
VTTLLQFMFACIGVQLFKGKFYRCTDEAKYTPEQCKGTFVVYKDGDVTHPMVRERLWHNS
DFNFDNVLMGMMALFTVSTFEGWPALLYKAIDANGENSGPIYNYRVEISIFFIVYIIIIA
FFMMNIFVGFVIITFREQGEQEYKNCELDKNQRQCVEYALKAQPLKLYIPKNPVQYKFWS
IINSTGFEYVMFVLILLNTVTLAVQHYEQSKTFSSIMDILNMVFTGLFTVEMLLKLLALR
LRHYFVDAWNSFDALIVVGSVVDIVVTEFSSGEDSSRVSITFFRLFRVMRLVKLLSKGEG
IRTLLWTFIKSLQALPYVALLIAMIFFIYAVIGMQTFGKIAMQDHTQINRNNNFQTFPQA
VLLLFRCATGEAWQEIMLASLPGKRCDPESDYEPGEEFSCGSNFAIVYFISFFMLCAFLI
INLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVALLRRIQPP
LGFGKLCPHRVACKRLVAMNMPLNSDGMVTFNATLFALVRTALKIKTEGNPEQENEELRV
IIKKIWKRMKPKLLDEVIPPHEAEEEVTVGKFYATFLIQDYFRKFRKRKERGALTGETDV
TNSSAVQLCKAGLKTLQDLGPEMRLAMNEDLEEEEEEEEGEEEGEDAMMEEEPREDVTYQ
GQNGFGPEKERQGSALTTPTGSAVGDVGVYNGGLIHRVGSLTKMPNGSEHDEHLHRGDNI
RSSVNHHHQKRPSLKNGLLDHAHKKPSYYKHGRRNSRERIWRNEQRNYNREDDSDSIAST
DRRPSDVPQLYRDHYEGYDHSCSYGNGDSEGRRTTRRRLLPATPTGRKPSFNIQCLRRQE
SSDDLPIPGTYHPTTQKFSSYDSHLSARSSAGSASSSASWANPCPRRGRLLYAPLILVED
KGSPPWGGGAASGERKKGGAGRAGVSVTGAEPRPAWYGGPAGTSAPPPPPYRAFTTLRVP
SQLGAQFSEKRGSADSLVEAVLISEGLGLYARDPKFVAFAKREIADACHMTVDEMESAAS
DLLGSTSRGFLSNAAADPVSLYSDDEPIRTSRDEDELADEMSCVTSF
NT seq
6264 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaggagagccgaagaagtgtcgggcgtaatggctacgccaatgctgtggatgga
gatgaggggggaggggatggtgagcaagaggaggaggggggtgagggggatggagaagga
ggaggaggaggaggggagaagagagacacagagtgggatgaagagctggatggagagaat
gagggaggagtggggatgacaaggactgacacgcttcactcaaccacaagttcaactggt
acacagaggaggagaggacaacacggcaaaaaacaggttcagggcagtaatcaggtgcag
cgagctcctcgagcgttatactgtctgaaactcaacaatccgatcagacgagctgctctg
tccatcgtcgagtggaaaccgtttgacgtcttcatcctgttagcaatctttgctaactgt
gtagctctgggtgtgtccaaaccgtttccagaggacgactctaattccaccaaccatgac
ctggaacaagtggagtacatcttcctcatcatcttcaccgtggagaccttcctgaagatc
ctggcctacggtctgttcatgcacccgagctcctacatacgcaacggatggaaccttctg
gactttgtcatcgtcattgtcggattgttcagcgtcgtcttggagacgatgactcataag
tctggcgagcaggcaaccacgcaccacatgcctggaaaacctggaggtctggacgtgaaa
gctctgagggccttcagggttctgaggccactgagactggtctctggtgtccccagtctt
cagattgtgttgaactccatcatgaaggccatggttcctctcctccacatcgctctgctc
gttctcttcgtcatcatcatctacgccatcatcggcctggagcttttcatcggacgcatg
cacaggacctgctactacacagcaacgaatatgtacgtggaggacgacccggtgccgtgt
gcgttcgcgggtcacggccgtcagtgtgtggtgaatggctcagagtgtcgaggagggtgg
gacggtcccaacggaggaatcaccaactttgacaacttcttcttcgccatgttgacggtg
tttcagtgcatcaccatggagggatggacagacgtcctctactggatgaacgacgccatt
ggctttgagctgccgtgggtgtatttcgtcagtctggtgatcttcggctcgttcttcgtg
ctgaacctggttctgggagttctcagcggggagttcagtaaggagagggagaaggccaag
gctcgcggagatttccagaagcttcgtgagaagcagcagatggaggaggacctgtgtggc
tacatggactggatcactcaggctgaagacatggacgaactggacgaggatggacactca
catccatctcttcgagacctttcagacaagaagagagggaagtttggatggttcagtcac
tccaatgatacacacgcaagtcttcctgccagtgaaacagcgtctgaaaacactgtaaac
attgatgaagaacacactaactgctgccaggcctgctgtgtccagatgatgaagatcaga
tgctgtcgtaagttgcggcgctggaaccgtgtctttcgcagaaactgtcgcacagctgtg
aagtcggtgaccttttattgggtcgttctgctgctcgtgttcctcaacacgtcgctcagc
gcctccgaacactacgaccagcccgactggctgacacaagtccaggacatcgccaacaag
gtgctcctgtctctgttcaccgtggagatgctgctgaagatgtacagcctcggcctggct
cactactttgtggcgttcttcaaccgcttcgactgtttcgtggtgtgcggtggaatcgtg
gagaccatcctggtggagttggacatcatgccgccgctgggaatctccgtgctgcgctgc
gtccgcctgctgcggattttcaaggtcacgcgacactggacggctctgtccaacctggtg
gcgtcgctgctgaactccatgaagtccatcgcgtcgctgttgctcctcctcttcctgttc
ctcatcatcttcgcgctgctcgggatgcagttgttcggagggaagttcaactttgacgag
acgcaaaccaaacgcagcaccttcgactcattcccgcaggcgctgctcacctgcttccag
atcctgacaggcgaggactggaatgtggtcatgtatgacggcatcatggcgtacggcggc
cccgtgtttcccgggatgatcgtgtgcgtttacttcgtcatcctcttcatctgtggaaac
tacatcctgctgaacgtcttcttggccatcgctgtggacaacctcgccggaggagacgga
gacgacaagaagaaggagaagaaggagggagcagaggaagaggagggggttgaggaggag
gaggctgaagagggagaagtgaaggtttgtcttcatgtcaacattgatgaagacactgag
tatgaggaggaggaggagccagaggaggaggaggaggggcttcatgaaggagatgatgat
ggtggcgtccagttaaagatggccgacctcactcctcctaaagaaaaggtgcttccaatc
ccagaaggcagtgcgttcttctgcctgagtaagacaaacccgatccgcgtgggctgtcac
actctgatccaccaccacatcttcaccaacctcatcctcgtcttcatcatcctcagcagc
tgctcattggccgctgaggatccaatcagagcccactccttcaggaacaacatcctgggt
tatgcagactacgccttcacctccatcttcactgtggagatcctgttaaagatgacggtt
cacggagcgttcctccaccagggttccttctgcaggaactggtttaacctgctggatctc
ctggtcgtcagcgtctcactcgtctccttcttcttacactccagtgccatctctgtggtg
aagatcctccgagtccttagggtcctgagacctttgagagccatcaacagagccaaagga
ctgaagcacgtggtgcagtgtgtgtttgtggcgatcaggacaatcggaaacatcatgatc
gtgacgacgttgcttcagttcatgtttgcctgcatcggtgtccaacttttcaagggcaaa
ttctatcgctgcacagatgaagccaaatacacacctgagcagtgcaaggggacgtttgtc
gtgtataaggacggtgatgtcactcacccaatggtcagagagcgtctgtggcacaacagt
gactttaactttgataacgtgttgatggggatgatggcgctgttcactgtctccaccttt
gagggctggcctgcgcttctgtacaaggccattgacgctaacggcgagaactctggtccc
atctataactaccgtgtggaaatctccattttcttcatcgtctacatcatcatcatcgcc
tttttcatgatgaacatctttgtcggcttcgtcatcatcaccttcagagagcagggagag
caggagtacaagaactgtgagctggacaagaaccagcgtcagtgtgtggagtacgctctg
aaggctcagcctctcaaactctatattcccaaaaacccggtccagtataagttctggtcc
atcatcaactccacagggtttgaatacgtcatgtttgttctgattctgctcaacaccgtc
accctggctgttcagcactatgaacagtcaaagacgttcagctccatcatggacatcctg
aacatggtcttcaccggactcttcactgtggagatgctgctgaagctgctggctctgaga
ctgaggcattactttgtcgatgcgtggaactcgttcgacgctctcatcgtggtcggcagc
gtcgtggacatcgttgtcactgagttcagtagtggagaagacagctccagagtctccatc
accttcttcagactctttcgagtgatgcgattggtgaagctgctgagtaaaggggagggg
attcgcacgctgctctggactttcattaaatcactgcaggcactgccttacgtcgctctg
ctcatcgccatgattttcttcatctacgctgtcatcggcatgcagacctttggaaagata
gcgatgcaggatcacactcagatcaacagaaacaacaactttcagacgtttcctcaggca
gttcttcttctcttcaggtgtgccacaggtgaggcgtggcaggagatcatgttggccagt
cttccagggaaacggtgtgatccagagtcagactatgaaccaggagaagaattcagctgc
ggcagcaacttcgccatcgtttacttcatcagcttcttcatgctctgtgcttttctgatc
attaacctgtttgtcgccgtcatcatggacaactttgactatctgacacgtgattggtcc
attctgggtccacatcatctggacgagttcaagaggatctggtctgagtatgatccagag
gccaaagggcggatcaaacacctggacgtggtggcgctgttgcggaggatccagcctcct
ctgggttttgggaagctctgccctcacagagtggcctgtaagcgtctggtcgccatgaac
atgcctctgaactctgacggtatggtgaccttcaacgccacgctctttgctctggttcga
accgcgctcaagatcaagactgaaggtaaccctgagcaggagaacgaagagctgagggtg
atcatcaagaagatctggaaacgaatgaaaccaaaactgctagacgaagtcattccacca
cacgaagcagaggaggaagtgactgttgggaagttttacgcaacgttcctgatccaggat
tatttcaggaagttcaggaagaggaaggagcgaggagctttgaccggagagacggatgtc
accaactcgtctgctgtccagttgtgtaaggcaggtctgaagactctgcaggatctgggt
ccagagatgcgtctggctatgaacgaggacctggaggaggaggaggaggaggaggagggg
gaggaggagggggaggacgccatgatggaggaggagccaagggaggacgtcacatatcag
ggtcaaaatgggtttggaccagaaaaagagcgacaaggctctgcactgactacgcctaca
ggttctgctgtgggcgatgtgggcgtatataatggaggtctgatccaccgggtaggctct
ctcactaagatgccaaatggcagcgaacatgacgaacatcttcatcgtggagacaacata
aggtcctctgtcaatcatcatcatcaaaaacgtccctcactgaagaacggcctgctggac
catgcccacaagaagccgtcatactacaaacatggaaggaggaactcaagggagagaatc
tggagaaatgaacagagaaactacaacagagaagacgacagtgacagcatcgcctccaca
gacagacgtccctctgatgtccctcagctctacagagatcactatgaaggttacgaccac
agctgtagctatggtaacggtgatagtgagggcaggagaaccacacgtagacgccttctt
cctgccacgcccacaggtcggaaaccgtcgtttaacatccagtgtttgaggagacaagag
agcagcgatgacctgcccatacctggaacgtaccatcctaccacacagaagttcagcagt
tacgactcccacctctctgctcgctcctcggcggggtctgcgtcctcctcggcatcctgg
gcaaacccctgtcctcgccgcggtcgcctcctctacgctcctctcatcctggtggaagat
aaaggcagcccgccctgggggggcggagccgccagtggggagaggaagaagggaggagca
ggaagagcaggagtcagtgtgacgggagcagagcccaggccggcgtggtatggtggtcca
gcagggacgtcagcgccgccgccaccgccgtacagagcatttaccacactgcgagttccg
tctcagctcggagcgcagttctccgagaaacgaggatcagctgacagcctggtggaggcg
gttctcatctccgaaggtctcggtctttacgcccgggatccgaagtttgtcgcgtttgca
aagcgggaaatcgcagatgcgtgtcacatgaccgtggacgagatggagtcggctgccagc
gacctgctcggctccaccagccgcggtttccttagcaacgccgccgctgaccctgtctct
ctctacagcgacgacgagccaattaggacgagtcgcgatgaggacgagcttgcagacgag
atgagctgtgtgacatcattctga
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