Solea senegalensis (Senegalese sole): 122778237
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Entry
122778237 CDS
T07721
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122778237 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122778237 (atrx)
03036 Chromosome and associated proteins [BR:
ssen03036
]
122778237 (atrx)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
122778237 (atrx)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
122778237 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
122778237
NCBI-ProteinID:
XP_043895826
LinkDB
All DBs
Position
LG12:7228728..7259106
Genome browser
AA seq
2086 aa
AA seq
DB search
MSLASSDSNLNQMAEKAEEPGSSTENMKPSSSRSRRKPTTVAKHTGPNESDTSAESENEG
ESSDNPSDNNTSKGTLVMRPAGNENKGAMKLRVDFKHKNTDDALQKKVNCTACGKQVNQF
QRNSVYEHPALKVLICKSCYKYYTSDDISKDSDGMDEQCRWCAEGGKLICCDYCNNAFCK
KCILRNLGRKELSVITDENSKWHCYVCRSDPLQDLASKCHLIMEEQKVVQHKQRKSDKTE
ERESKRHKNKSGNEHKVVVNGKEHTEATGTMSFTYKKLQVPKELIKKTKKLVETTTGLNN
TFIQFIQQSAVDQGDKSIRFRHLKAFQAVLADLKKAHTALEEALEPEFRSMEFQNGNEGQ
RVVKKTTSPVAIVKNDHMNTAVAAAVDADTPEELDQNMDEGPDQKVAEDPDQEMAEDLDQ
EVAEDPDQEVAEDPDQEVAEDPDQEVAEDLDEEVDEDSDLKLDQGPEQVLDQEPEDEQHN
ESVVDNDQVSSPAEMKDSQTEIDETKKTIKTEVCDDGLVSGGEMSLDHDIMSVPPSVPEE
LFQMVESLADSTMLSQSDAAPNTDARSNRNSDSQNPQPKVKNLIVKLTPVPVVTTRSPRS
SRSSNREKGEEVQKKCKEEREEKEESADTVDGSESPRASRRSSRVKTTPLRKQAENNCKE
ESSDSESEEDVKEKAKPSKNSKKEDKKQTMASVKNTVDSDSDEVPHILLEKAAEGHSSDE
EQGSTSAKKRLFKQNNTVSENADKASKRKRKSESSDSGEEKKSKKTSKKKKQNSSNSSNS
DSETKGKVGTAKRRSSRVKKQDETKEEDKNSPEGKAADRKRSYEKKCKKRSSRSTLKLKS
SSSEDDEEQQDEGGSGEDSDEQKIKPIVEDNVLGGNGPFHQSSGDEMEGKEDSQVGEEDY
DDDPENRIAKKMLLAQIKSNYSSGAESSSDNEGEDKDEKSSKKAKKEDDDDEDDDDDDEE
QQDDDNSDDSGSDIEVKKQGRRHKLLRHKLSLSEGESGEEKASSKEKSKGGKKSTRKVGS
DDSADSDFEKSESSEESAVSEEVSESENDGKRRKTRSAKKKDDEKRSYKQKKKRRRIKVQ
DSSSSNEKSGEEGDDDDDKDGKKGRKKLRKILKDDKLRTETRDALKEEEERRKRIAEREA
LREKLREVIVVKESSQMTCPITTKLVLDEDEETKEPLVQVHRNLVTKLKPHQVDGVQFMW
DCCCESMKKIEKSAGSGCILAHCMGLGKTLQVVTFLHTLLLCEKLEFTTALVVCPLNTVL
NWLNEFEKWQEGMEDEESLEVTELATVKRPQERSYALQRWQESGGVMIMGYEMYRNLTQG
RNIKSKKLKEIFQKTLVDPGPDLVICDEGHILKNEASAVSKAMNSIRTRRRVILTGTPLQ
NNLIEYHCMVNFIKENLLGSVKEFRNRFINPIQNGQCADSTLQDVRIMKKRAHILYEMLA
GCVQRKDYTALTKFLPPKHEYVLSIRMTPIQCKLYRYYVEHFTGVGNALEGGRGRAGTKL
FQDFQMLSRIWTHPWCLQLDYISKENRGFFDEDSMDEFIASETEESSMSMTSEDEKSKRK
KKQKKGKKKGSDDSDSDEVEVIKEWNTSSRGKNGESRSRPEPVEEPRTTSSAPGSPCADW
HRDFVTDADAEILEHSGKISLLFEIMRMAEEVEEKVLVFSQSLISLDLIEDFLELACRAK
DEDKISPYKGEGKWFRNIDYYRLDGSTNATTRKKWAEEFNDTSNVRGRLFLISTRAGSLG
INLVAANRVIIFDASWNPSYDIQSIFRVYRFGQIRPVFVYRFLAQGTMEEKIYERQVTKQ
SLSFRVVDQQQIERHFTMNELTELYNFEPDMLDDPSDKKSKKATPVLPKDLFLAEMLKNN
KDQIVCYHEHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGLSMRTNYQTYANMDTGASGY
FNYNVAALASLSNQQLEELINQGRQKVIEATNALKCLPRESVEDTIARLWKENPALTESQ
VKAMALSRQATVELEIKRREQVYREVLSSQQTLMMFVQKLITNRKVQEQQLAMANQASYL
NQLALQNGMMGGSGLSQVDLLGLYQQYHGLGSRQGMGKNPGPSKGL
NT seq
6261 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggcatcttctgattcaaaccttaatcaaatggcagaaaaagcagaggaacct
ggtagctcaacagaaaacatgaagccatcctcttctcgcagcaggaggaagccaactact
gtagcgaagcacactggacctaatgaatccgacacctctgctgaaagcgaaaatgaaggt
gaaagctctgacaatccttcagacaataacacgtctaaaggcactctcgtgatgaggcca
gctggcaatgaaaataaaggtgccatgaagctcagagtggattttaaacataaaaatact
gatgatgccctgcagaagaaggttaactgcactgcatgtggaaaacaagtaaaccagttc
cagcgcaactctgtgtatgagcatcctgcactcaaagtccttatttgcaagtcatgctac
aagtattacacaagtgatgacatcagcaaagactctgatgggatggatgaacagtgcagg
tggtgtgctgaaggaggaaaactcatctgctgtgattactgcaacaatgctttttgcaag
aagtgcattttgcgcaacctgggcaggaaggagctgtcagtcattactgatgagaactca
aaatggcactgctatgtctgtaggtcggatccccttcaggatctggcctctaaatgtcac
cttattatggaagaacagaaagttgtgcaacacaagcaaaggaaatcggataaaacagag
gaacgcgaaagcaagagacacaagaataaatcaggtaatgagcacaaagtggttgtcaat
ggaaaagaacacacagaagccacagggactatgtcctttacctacaaaaaactgcaggta
cccaaagaactaataaagaaaacaaaaaaacttgttgaaactacaactggtctcaacaat
acattcatccagttcattcagcagtcggctgtggatcagggagataaatccatcaggttt
cggcatttgaaagcattccaggccgtacttgctgatttgaagaaggcccacactgctttg
gaggaggctttggagcctgagttcagaagcatggagttccagaatgggaacgaagggcaa
cgtgttgtgaaaaagactactagtcctgtggccattgtaaaaaatgaccacatgaatact
gcggtggcggctgctgttgatgctgacacacctgaggaactagaccagaacatggatgag
ggtccagaccaaaaggtggctgaagatccagatcaggagatggctgaggatctggatcag
gaggtggctgaggatcctgatcaggaggtggctgaggatcctgatcaggaggtggctgag
gatccggatcaggaggtggctgaggatctagatgaagaggtggatgaggattcagacctg
aagctggatcaagggccagaacaagttctggaccaggagccagaagacgagcagcataat
gagagcgtggtggacaatgatcaagtttcaagtccggctgaaatgaaagacagccaaaca
gaaattgatgaaaccaaaaagacgataaaaaccgaggtctgtgacgatggactagtgtca
ggtggggaaatgtccttggatcacgacatcatgtctgtgcccccgtctgtgcctgaagaa
ctttttcagatggtggagagtctggcagattccaccatgctctcacagagtgacgcagct
ccaaacactgatgcaagatcaaatagaaactcagactctcaaaacccccagcccaaggta
aagaaccttatagtcaaactgactcccgtaccagtcgtgacaacccgtagtccaaggtcc
tccaggtcctcaaacagagaaaaaggtgaagaagtgcagaaaaagtgtaaagaagaaaga
gaggagaaggaggagtctgctgatacagttgatgggtctgaaagcccacgtgctagccgt
cgctctagcagagttaagaccacccccttgaggaagcaggctgagaacaattgcaaggaa
gagtcctctgattcagagtctgaggaagatgttaaagaaaaggccaaaccatccaaaaac
tcaaaaaaagaggataaaaagcagacaatggcttcagtaaaaaatacagtggactctgac
tcggatgaagttcctcacatattgctagaaaaagcggcagaaggccacagttcggatgag
gaacagggaagcacaagtgctaaaaagcgtttgtttaagcaaaacaacacagtctcagag
aatgcagacaaagcatccaaacgaaaaaggaagtctgaaagctcagattccggtgaggag
aagaagagtaagaagacttccaagaagaagaaacaaaactcctccaactcctccaactct
gactcggagacgaaaggtaaagtaggcacagccaagagaagatcaagccgtgttaagaaa
caagatgaaacaaaggaggaagataaaaactcacctgaggggaaggcagcagatcggaaa
aggtcgtacgagaaaaagtgcaagaaaaggagctccagatcaaccctcaagctgaagtca
tcatccagtgaggatgatgaggagcagcaggatgaaggtggctctggagaggacagcgat
gagcaaaagatcaagccaatcgtggaggataatgtgctgggaggcaacggacccttccat
cagtcttcaggtgatgaaatggagggtaaagaagactctcaggttggtgaagaggattac
gatgatgatcctgaaaacaggattgcaaagaaaatgcttctagcccaaataaaatccaac
tattcttcgggagcagagagttcctctgataatgaaggagaagataaggatgaaaagtcc
tctaaaaaagcaaaaaaagaggatgatgatgatgaggatgatgacgacgacgacgaagag
cagcaagatgatgacaattcagatgattcaggttcagacattgaagtgaagaaacaaggt
cgccgccataaactgcttcgtcataaactctcactgagtgaaggtgaatcaggagaggag
aaagcttccagtaaagagaagagcaaaggtggcaagaagtcaactcgtaaagtgggcagc
gatgactctgcagactcagactttgagaagtcagagtccagtgaagagtcggcagtaagc
gaggaggtcagtgaatcggaaaatgacgggaagcgccgaaagacaagaagtgcgaagaag
aaggacgacgagaaacggagttacaagcagaagaagaagcgtcgtagaatcaaagttcag
gattcctcctccagcaatgagaagagtggggaagaaggtgatgacgacgatgataaagac
ggtaaaaaaggacgaaaaaagcttcggaaaatcctgaaggatgacaagctgcggacagaa
acaagagatgctttgaaggaagaggaggagagacggaaacgcatagccgagagggaggca
ctgagggagaaacttcgagaggtgattgtggtgaaggagtcttcccagatgacgtgtccc
atcacgaccaaactagtgctggatgaggatgaagaaaccaaggagcctttggtgcaggtg
cacaggaaccttgtcacgaagctgaaacctcaccaggttgatggggtgcagttcatgtgg
gactgctgctgtgaatctatgaagaagattgaaaagtctgctggctctggctgtatcctc
gctcactgtatgggcctgggaaaaactctgcaggtggtgacattccttcatactttgctg
ctttgtgagaagctggagttcaccacagcactggtggtttgtcccctgaacactgtcctg
aattggctcaatgagtttgagaagtggcaagaaggaatggaagatgaggagagtttagag
gtgactgagctggccacagtaaaaaggccacaggagcgatcatatgctctccagcgatgg
caagaatcgggaggcgttatgatcatgggctacgagatgtaccgaaacctgacacagggc
aggaacatcaagagcaaaaagctcaaagagatctttcagaagacactggtagatccaggt
ccagacttggtcatttgtgatgaaggtcatatcctgaagaatgaggcgtctgcagtgtcc
aaagcaatgaactctatcaggacgaggaggagagttattctgactggaacccctctgcaa
aacaaccttattgaataccattgcatggtcaacttcatcaaggaaaacttgcttggatca
gttaaagagttcaggaatcgcttcattaaccccatccagaatggtcagtgcgccgactcc
acactacaagatgttcggatcatgaagaagagagctcacatcctctatgagatgctggct
ggctgtgtccagaggaaggactacactgcactcaccaagttcctgcctccgaaacatgaa
tatgtgctgtcgataagaatgactccaatccagtgtaaactctacaggtactatgtggag
cacttcacaggtgtggggaatgctttggagggaggccggggccgtgcagggaccaaactc
ttccaggatttccagatgctcagcagaatctggacccatccctggtgccttcagctggac
tacatcagtaaagaaaacaggggattctttgacgaggacagtatggacgagttcatcgcc
tcagaaacagaagaatcctcaatgagcatgacctcggaggacgagaagtctaaaaggaaa
aagaagcagaagaagggaaaaaagaagggatctgatgactctgacagcgatgaggtggag
gtcatcaaggagtggaacaccagctctcggggcaaaaacggagagagcaggtccagacca
gagccggtcgaagaaccacggaccactagctcagcaccagggagcccctgtgctgactgg
cacagagattttgtcaccgacgctgacgccgagattctggagcactctggaaagatatcg
ctcctctttgagatcatgcggatggcagaggaggtggaggagaaagtgttggtgttcagt
caatctctaatctctctggacctaatcgaggatttccttgaattggcatgcagagcgaaa
gatgaggacaaaatatcaccttacaaaggtgaaggcaagtggttcaggaacattgactac
tatcgtctggatggatccactaatgccactaccagaaaaaagtgggctgaagagtttaat
gacaccagtaacgtaagaggtcgtttgtttctcatctctacacgagctggctcacttggc
atcaaccttgtggcagccaacagggtcatcatctttgatgcctcctggaacccttcttac
gacatccagagcatcttcagagtctaccgctttggccagatcaggcctgtgtttgtctat
aggttccttgcccagggtacaatggaggagaagatttatgagcggcaggtaaccaagcag
tctctgtcattccgggtggtggaccagcagcagattgagaggcacttcacgatgaacgag
ctgaccgagctctacaacttcgagccagacatgctcgatgatccctcagacaagaagagc
aaaaaagccacgcctgtgctccctaaggatctcttcctggctgaaatgctgaagaacaat
aaggaccagattgtgtgttaccatgaacacgactccctgctggaccacaaggaggaggaa
gccctgagcgaggaggaccgtaaggctgcctgggccgagtatgaagccgagaaaaagggt
ctttccatgaggaccaactaccagacatatgccaatatggacacgggcgcctccggctac
ttcaactacaacgtggcggctttggcctccctgtccaaccagcagctggaggagctcata
aaccagggacgacagaaagtaattgaagcaacaaacgcattaaagtgtttaccacgggag
tcggtggaggacaccatcgcgagactgtggaaggagaacccggcactcactgagagtcag
gtcaaggcgatggctctgtcacgacaggccaccgtggagctggagatcaagcgcagggaa
caggtctacagagaagtcctctccagccagcagacgctgatgatgttcgtgcagaagctg
atcaccaacaggaaggtgcaggagcagcagctggccatggcaaaccaggcaagctacctg
aaccagctggccctgcagaacggcatgatgggaggcagcgggctcagccaggtggaccta
cttggactgtaccagcagtaccatggcctggggtcccgccaaggcatgggcaaaaatcct
gggccctccaagggcctgtag
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integrated database retrieval system
