Solea senegalensis (Senegalese sole): 122778314
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Entry
122778314 CDS
T07721
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssen04990
]
122778314
Domain-containing proteins not elsewhere classified [BR:
ssen04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
122778314
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
DUF6215
Motif
Other DBs
NCBI-GeneID:
122778314
NCBI-ProteinID:
XP_043895991
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All DBs
Position
LG12:1560112..1635311
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AA seq
1336 aa
AA seq
DB search
MASPVADIGQSHHHHHQQQQHQHPPPPHHQQQPGTVSAADSAFQEAQKWIEAVTGRCFGD
KDFRGGLENGILLCELLSSIKPGLVKKINRLPTPIAGLDNLSVFLRGCEELGLKGSQLFD
PGDLQDTPTRPTAKGSDCSRKLKNVLITIYWLGRAANGCTSYNGPTLDLKEFEGLLAQMR
KEAEEAESPKRSIRDSGYIDCWDSERSDSLSPPHHGREDSFDSLDSFGSRSRQTPSPDVP
VARCSSDGRGSDSESDGPNLRKMPDLRKDDMLARRTSVSEPRTAMPFNQYLPNKSNQSGY
VPTPLRKKKSDKEDGGRKSWSTATSPIGGDRPLSPNGNPRLDTQTPHSTPPPEPHTQIHV
DHQRVEEEEEEEEGELTASTASRRSSEPLHCSLLQPHAEPHTETVTHPTVTSEYSSPARS
CSEELFRRSPTTPSGNGNAMAASGGTPEREEFRVRMVVAGTPPVADVDQVEKQVCRLLTS
PKRIATLSPSHLLSVPAAMATTSKETASTGKRRGRALSESDDPQGGTSWLDNDLPATFSR
TDSVSDDSQSVSMIDMRGEEETITQPHNQVRHALMHNQYTKMKEEEDHWQDDLAKWKNRR
RSVSQDLIKKEEERKMMEQLLTGDTCISQRRRSIKTYREIVQDKERREEELRDAYRRART
PEEASAILHRYAQRFSISDAVLERLQLPKLLDRSISADPSFPGSPFPLSLSASPTTPDPF
DEDPNGPLRFLRQQSAPAPKFTSTLEARIEEFPKDSSSHQRPQIRSRSSEPPSTHSALSP
KPVPLLTPKPYFESGARAAESRANKADGFLRVNGNGGDNGVPTSPERRGRESPPRFEASP
SYTNTITVDTSSSSSAAAAAAAAASPAHHCPLVSPTGGSPVLAKAKEAQGGTEEVSEDLQ
EQRGTEHSSPLSRPTSLPAELQKPQESFWKAENQAAAAAAAPQENNSDAAAHPAPHTEAK
QEEGKVEPSAQNNCSLVQSGVDAPQNPPVTSQASFLTSQESQKRESELSSAASQPSQEIT
AELANTVRSPLATSNPKLRCEFFAPPGEAEKERRGSEKYRREQEKLKEEWEKAQREVAEE
ERKYHEEERRILEETVAPLTPRSSALPSPSRGELSSTAEPHDTIVRSLADWERKQELLER
QSRASVESAEGRRRENDRTSDISTADDSMKTGRSLVSQSSSQQETLAHSLQNGQKAPHMK
PSTPVKKHPELTADGNKAGRPAGERRAGPVDNNMSRSSSKPPAACPPTADSLPPSPNRSV
SGKKLCSSCGQPLGKGAAMIIETLSLYFHIQCFKCGVCKGQLGDTTTGTDVRIRNGLLNC
QQCYIRSRSAGQPTTL
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtccggtggcagacataggacagtctcatcatcatcatcatcagcagcagcag
catcagcatcctcctcctcctcatcatcagcagcagcctggcactgtgtcggccgcagac
tccgcgttccaggaggcgcagaaatggatcgaggccgtgacgggaagatgttttggtgac
aaagatttcagagggggtttggagaacggcatactgctgtgcgagttgctgagctccatt
aaacccggtctagtgaagaaaattaacagactccctacacccattgctggtctggacaac
ctcagtgtgtttcttcgcggctgtgaggagttgggactgaaaggctctcagctgtttgac
cccggggacctgcaggacacgccgacacgccccaccgccaagggaagtgactgcagccga
aaactcaagaatgttttaatcaccatctactggttgggtcgtgctgccaacggctgtacc
tcctacaacgggcccacgctggacctgaaagagtttgaaggcctgctggcgcagatgcga
aaggaggcagaagaggcagaaagccccaaacgcagcatccgtgacagcggctacatcgac
tgctgggactccgagcgcagtgactctctctccccaccacaccacggccgcgaggactcc
tttgacagcctggactccttcggctcgcgctcacgacaaaccccgtcgccagacgtcccg
gtcgcccgctgcagcagcgatggtcgtggcagcgactcggaatccgacggtcccaacctc
cgaaagatgcccgacctccgcaaagacgacatgctggcacgtcggacgtccgtcagcgag
ccgcggaccgccatgcccttcaaccagtacctccccaacaagagcaaccagagtggatac
gtgcccacaccgctgcgcaagaagaaaagcgacaaagaggacggaggacgcaagagctgg
agtactgccacgtcacctatagggggagacagacctctcagtccaaatggcaaccctagg
ctagacacccaaactccacactccaccccgccccctgaaccccacacacagattcatgtg
gaccatcagagagtagaggaggaggaggaggaggaggaaggggagcttactgcatccaca
gcgagcaggaggagcagtgagcctctgcactgtagcctcctccagccccatgcagagcct
cacacggagactgtaactcacccgacagtcacatctgagtacagcagtccagctcgctcc
tgctcagaggaactgttccgccgctcgccaacaactccgtcaggaaacggaaacgccatg
gcagcgtcgggagggacgccagagagggaggagtttagagtgaggatggtagtcgctggc
actccacctgtcgcagacgtagaccaggtggagaagcaggtgtgtcgactgctgacctct
cctaaacgcattgccaccctgagtccctcccacctgctttcagtgcccgctgccatggca
accacttcaaaagaaacagccagtacgggcaaacgaaggggcagggcactgagtgaaagt
gacgacccacaaggagggacgtcgtggttggacaacgatcttccagcaacattcagccgc
acagatagtgtgtcggacgattcacagagtgtgagtatgatcgacatgcgtggtgaagag
gagaccatcacgcagccccataatcaggtgcgtcatgcgctgatgcacaatcagtacacc
aagatgaaggaagaggaggatcactggcaggatgacctggcgaagtggaaaaatcggagg
aggagtgtttctcaggacctgatcaagaaggaggaggagaggaagatgatggagcagctg
ttgactggagacacctgtatctcgcagaggaggagaagcatcaagacgtacagagagatc
gtgcaggacaaagagcgtcgtgaggaggagctgcgtgatgcctacagaagagccagaacc
ccagaggaggcgtcggccatcctccaccgttacgcccagcgcttctccatcagcgacgcc
gtcctggagcgcctgcagctgccaaagctcttggatcgcagcatctccgccgacccctcc
ttccccggctcgcccttccctctctccctctccgcctccccgacgacccccgaccccttt
gacgaggaccccaatggcccgctgaggttcctgcgccagcagtccgctccggctccaaag
ttcacgtccacgctggaggcgcgaatcgaggagtttcccaaagactcgtcctcgcaccag
cggccccagatccgctcccgctcgtctgagccgccgtccacgcactctgctctgtcgccc
aaaccggtacctctgctgacacccaagccttactttgagtccggagccagagcggctgag
tcgagggccaacaaggcagacggtttccttcgcgtcaacggcaacggaggagacaacggc
gttcccacttcacccgagcgccgaggaagagaatctcctcctcgtttcgaggcgtctcct
tcttacaccaacaccatcactgtcgacacgtcctcctcttcttcagcagcagcagcagca
gcagcagcagcgtctcctgcacaccactgtccactcgtgtcaccaacaggaggaagtcca
gtgttggcaaaggccaaagaggcacaaggtggaactgaagaggtttctgaggatctccaa
gagcagagaggcaccgagcattcatcgccactcagtcggccaacctcacttccggcggaa
ctgcagaagccacaggagagcttttggaaggctgaaaaccaggcggcggcagcagcagca
gctccacaagagaacaactctgatgctgcagctcacccagctccacatacagaagccaaa
caggaagaaggaaaggttgaaccatcagctcagaacaactgcagtctcgtccagtcgggg
gtcgacgcaccacagaatccgcctgtaacgtcacaggcgagtttcctcacttcccaggag
tcgcagaaaagagagagtgagctcagctcagctgcttctcagccgtcacaggagatcaca
gcagagcttgcaaacactgtcaggtcgccgctggcaaccagcaaccctaagttacgctgc
gagttcttcgctccaccaggagaggcggaaaaggaacgccgtggaagcgagaagtaccgg
cgcgagcaggagaaactgaaggaagagtgggagaaagcacaaagggaggtggcggaggag
gagaggaagtatcatgaggaggagcgtaggatactggaggagaccgtggcgcctctcact
cctcgctcctccgctctgccgtcccccagccgtggcgagctctcgtccaccgccgagccc
cacgacaccatcgtccgctctctggccgactgggaacgcaaacaggaactgctggagagg
cagtcgagggcgagtgtggagagcgcggaggggagacggagggagaacgacagaaccagt
gacatcagcacagctgatgacagcatgaagacaggcagaagcttagtgagtcagagcagc
agtcagcaggaaacactcgctcacagtctgcagaacggccaaaaagctcctcacatgaag
ccctccactcctgtgaagaaacatccagagctgacggcggacggcaacaaggccggccgg
cctgcaggagagaggagggctggtcccgttgataataacatgagccgcagctcatcaaag
cctcctgcagcatgtccacccactgcagactcactgcctccatcaccgaacaggtctgtc
agtgggaagaagctttgctccagctgtgggcagccgttaggaaaaggtgccgcgatgatc
atagaaactctcagcctctacttccacattcagtgcttcaagtgtggggtgtgtaaggga
cagttgggcgacacgaccacaggaaccgacgtgcgaatccgaaacggcctcctcaactgc
cagcagtgctacatccgctcccgctctgccgggcagcccaccacgttgtga
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