Solea senegalensis (Senegalese sole): 122779420
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Entry
122779420 CDS
T07721
Name
(RefSeq) ras-related protein Rab-39B-like
KO
K07925
Ras-related protein Rab-39B
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122779420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122779420
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ssen04031
]
122779420
Membrane trafficking [BR:
ssen04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
122779420
GTP-binding proteins [BR:
ssen04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
122779420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
RsgA_GTPase
AAA_22
TniB
Motif
Other DBs
NCBI-GeneID:
122779420
NCBI-ProteinID:
XP_043897697
LinkDB
All DBs
Position
LG13:2855833..2860505
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AA seq
213 aa
AA seq
DB search
METIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHNWLEEAQSHVQPHSIVFLL
VGHKCDLEAQRQVTQQEAEKLAGAYGMRYVETSAREAINVEKAFVDLTRDIFDLVRSGDI
KIQDGWEGVKSGFVPNTVHSSEEVTKGGRQCFC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggagacaatatggctttatcagtttcgcctgatcgtcatcggagactccacagttggc
aagtcgtgtctgatccggaggttcaccgagggccgcttcgcccaggtgtcggaccccaca
gtgggagtggacttcttctcacgtctggtggaaattgaacctggcaaaaggatcaaactt
caaatctgggacactgcaggacaagagaggttcaggtccatcaccagagcctactaccgc
aattcagtgggtggtctcttactctttgacatcacgaaccgcagatccttccaaaacgtc
cataactggctggaggaggcccagagtcacgtccagcctcacagcattgtcttcctgctg
gtgggtcacaagtgtgacctggaggcccagcgtcaggtgacccagcaggaggccgagaag
ctggcaggagcctacgggatgagatatgtggagacgtcagcacgagaagccatcaacgtg
gagaaggcatttgtggatttgacgagggacatctttgaccttgtccggagcggggacatc
aagatccaggatggctgggagggcgtcaagagcggatttgttcccaacaccgtccattcc
tccgaggaggtcactaagggcggccggcagtgcttctgctga
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integrated database retrieval system
