Solea senegalensis (Senegalese sole): 122787047
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Entry
122787047 CDS
T07721
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssen03021
]
122787047 (chd1)
03036 Chromosome and associated proteins [BR:
ssen03036
]
122787047 (chd1)
Transcription machinery [BR:
ssen03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
122787047 (chd1)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
122787047 (chd1)
SLIK complex
122787047 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
122787047
NCBI-ProteinID:
XP_043909533
LinkDB
All DBs
Position
LG21:complement(3040847..3068457)
Genome browser
AA seq
1811 aa
AA seq
DB search
MAGRSEDESVSNSSGESSNSDDESGSGSGSASGSGSGSSSSSSSSSSQSGSSGSDSGSQS
DSDAEKSKEKMEPPNKSNIDGAEFWRSNPSILAVQRSAMLRKQQLQQQQQQQQQQQQQRQ
SSSNSGSDEDSSSDESDSSSGSKRRRNSGSSDSGSGSGSGSGSGSDSSAEENSDETASDY
EPSHKIKSRKPPTKMNYRNGKKSSTQKKKNKKGSSSEDEDENYKKVASAGPRRQATVNVS
YKEDEELKTDSDDVVEVLGEDVPQPEEDEFETLERVMDSRIGRKRATGSVTTVYAVEADG
DPNSNFEPNKEAGEVQYLIKWKNWAHIHNTWETEDTLKVQNVKGMKKLDNFKKKDQEKKK
WLKAASPEDIEYFNCQEELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLSYSEV
SWEDGGLIGKKFQKCIDDYMNRNQSKTIPSRDCKVLKQRPRFVPMKKQPSYIGGDGLELR
DYQLDSLNWMAHSWCKGHSCILADEMGLGKTIQTISFLNYLFNEHQLYGPFLLVVPLSTL
TSWQREIQLWAPQMNVVVYLGDISSRNMIRTHEWMHVHSKRLKFNILLTTYEILLKDKSF
LGSVNWAFIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP
EKFHSWELFEEDHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQ
KQYYKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPEDNEFFNRVEALQH
LIRSSGKLVLLDKLLLRLKERGHRVLIFSQMVRMLDILADYLRSRQFLFQRLDGSIKGEM
RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG
QKRQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSAPFNK
EELTAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVA
NFSVMEDEEIDMDSERSHLSWEVIIPEEQRRRMEEEERQKELEEIYLLPRMRNCAKQISF
NSGGRQSRNRRYSGSDSDSPSDRKRPKKRGRPRTIPRENIKGFSDAEIRRFVKSYKKFGG
PLERLDAIARDAELVDKSEHDLKRLAETVHNGCVRTLRENPCGPDKTSGGRRGKVKGPTF
RISGVQVNAKLVISHEEELAPLHKAIPADPEERKKYMIPCHSKAAHFDIDWGKEDDSSLL
IGIYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEA
QKQAGTANSRKRKPRSKKSKTLKPTKTDEVIKSPSSDPPSDKGSDEDEDDDDDDDIKVEK
ETAPVKPPSRPSRADRVVMKEEDDEDEEEEEEEEPEQEEVSSSGEREIKEKEIKKEGKKE
KKEESWDIKETKEPKEKKEAKPVEAVNKQEENADKNEVKTEAREWTKKASDVPVHITASG
ENVPISEESEELDQRTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDH
ITECLKEYSNPDQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQENAQAMEQNTRS
LSTHGYKHADADRLKDNSHQDESSRDSYSSERHQSTGRYHENSGGKERHITDSHRKTSGG
ESRKRPYSSFSNGKDHRDRDHYRPDSRDRDRDRDRDRDRDRQDRYYNDSKHRKLEDFRSS
RDHRLDVKDYSHSDQRSTYRYHSDWQNEQRASASGPRSPRDQRSPYDARSPFDYSSDHKS
TPEQIWSSRKT
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgcagtgaagatgaaagtgtcagcaatagcagtggagaatcaagcaattca
gatgatgaatccggttctggatcgggctccgcatcagggtcaggctcaggctccagttct
agttcctctagcagcagcagtcaatcagggagcagtggctcagactccggcagccagtca
gactctgacgccgaaaaatccaaggagaagatggaaccaccaaataaatcaaacatcgat
ggagctgagttctggaggtccaacccaagtattctggcagtgcagaggtctgcaatgctc
cggaaacaacagcttcagcagcagcagcagcagcagcagcagcaacagcagcaaagacag
agctcttcaaacagtggatctgatgaggactcatctagtgatgaatcagactcatctagt
ggatccaaaagaagaagaaattcaggttcctctgattctggatcgggttctgggtctgga
agtggttctggatcagactcatcagcagaggaaaacagcgatgaaacggcatcagactat
gagcccagtcacaaaatcaaaagcagaaaacctccaaccaagatgaattatagaaatggt
aagaaaagcagcacccagaagaagaaaaacaagaagggctcgtcttctgaagatgaggat
gaaaactacaagaaggtggcatctgcggggccacggcggcaggccacggtcaacgtcagc
tacaaggaagatgaggagctgaagacagactcggatgatgtggtggaagttctgggtgaa
gatgtaccacagcctgaggaagatgagtttgaaacacttgaaagagtgatggacagcagg
ataggaaggaaaagagcaacaggaagtgtgaccactgtatatgctgtagaagcagacggg
gatcccaattccaactttgaaccaaacaaagaggctggtgaggtccagtatttgataaag
tggaagaactgggcccacatccacaacacgtgggagacagaggacacacttaaggtgcag
aacgtcaagggcatgaagaaactggacaatttcaagaagaaagaccaggagaagaagaaa
tggttaaaggcagcttcaccagaggacatagaatatttcaattgtcaggaggagttgatg
gatgaccttcattctcagtaccaattagtggagcgaatcataggccattcaaaccagaag
tcagcggctggttatccagactacctgtgcaagtggcagggtttatcatactcggaggtt
agctgggaagatggtggtttgattggcaaaaagttccagaaatgcatcgacgattacatg
aaccgaaaccagtcaaagaccattccttctagagattgcaaggtgctcaaacagagaccc
aggtttgtacccatgaagaaacagccatcgtacataggaggtgatggactggagctgcga
gactaccaactggacagtttaaactggatggcccactcctggtgcaaaggacacagttgt
atccttgctgatgaaatgggtttaggaaagactatccagaccatctccttcctcaactac
ctgttcaacgagcatcagctgtatgggcccttcctgctggttgtgcctctttctacactg
acctcttggcagagagaaatccaactctgggcccctcaaatgaatgttgtggtgtacctg
ggagacatcagcagcaggaacatgatcaggactcatgagtggatgcatgttcacagcaag
agactgaaatttaacatcctcctcacaacgtatgagattcttctcaaagataagtcattt
ttgggcagtgttaactgggccttcattggtgtggatgaggcacaccgactgaagaacgat
gattccctcctctacaaaaccatgattgacttcaagtccaatcacaggcttctgatcaca
ggaacgccactgcagaactcgctgaaagaactctggtccctgctgcacttcatcatgcct
gagaagtttcactcttgggagctgtttgaggaggaccatggtaaaggtagagattcgggc
tacaccagtctgcacaaagaactggaacctttccttctgcgcagagtcaagaaggatgta
gagaaatcacttcctgccaaagtggagcagattctcagagtggagatgagtgctatccag
aaacagtattacaaatggatcctgaccaggaactacaaggctttgagtaaaggtaccaaa
ggcagtacttcaggtttcctgaacatcatgatggagctgaagaagtgctgtaaccactgt
taccttatcaagcctccagaggacaatgagttcttcaacagagtggaagccttacagcac
ctaatccgcagcagtgggaagttggttctgttggacaaacttctgctgcgtttgaaggag
cgaggccacagagttctcattttctcccagatggtacggatgctggatatcctggctgat
tatctgaggagtagacaattcctctttcagagattagacggttcaatcaagggagagatg
aggaagcaggcgttggaccactttaacgcggagggctcagaggacttctgcttcttgctt
tcaacacgtgcgggtggtctgggtatcaatctggcatcggctgacaccgtagtcatcttt
gactccgactggaatcctcagaatgatctgcaggcccaggccagagcccacagaattgga
cagaagagacaggtgaatatctaccgtctagtgacaaagggatcagtcgaagaggacatt
attgagagggcgaagaagaaaatggtgctggaccacctggtcattcagaggatggacacc
accggaaaaactgtccttcatactggtgctgctccctccagttcagcacctttcaataag
gaggagcttactgccatcctgaagtttggtgctgaggagcttttcaaagagccagaggga
gaagagcaggagcctcaggaaatggacattgacgagatcctgaaaagagcggagaccaga
gagaatgaccctggaccctccactgttggagaagagcttctgtctcagttcaaggtagcc
aacttctctgtaatggaggatgaggaaatagacatggattctgagcgcagtcatctgagt
tgggaggttattattcctgaggagcagaggaggaggatggaggaagaggagagacagaag
gagcttgaagaaatctacttgctaccacgtatgaggaattgtgccaaacagataagcttt
aattctgggggccgacaaagcagaaacaggagatactctggttctgacagtgattcaccc
tcagaccgaaagaggccaaagaaacgagggcggcccaggaccataccacgagagaatatc
aagggtttcagcgatgccgagatccggaggtttgtgaagagttacaaaaagttcggtgga
ccactggaaaggttggatgcaattgctcgtgatgctgaacttgtagataagtctgaacat
gacctgaaacgcttggcagaaactgttcataatggctgcgtgagaacactacgagaaaac
ccctgtggaccagacaaaacctcaggaggcagacgagggaaggtaaaaggcccaacattt
aggatctctggagtccaggtgaacgccaaacttgttatctctcatgaggaagagctggct
ccactccacaaggccattcctgctgacccagaggagagaaaaaagtacatgattccatgc
cattcaaaggcagcacactttgacattgattgggggaaggaagatgactctagcctcctc
ataggaatctatgagtacggttatggcagctgggaaatgatcaagatggacccggacctc
aatctcacacacaagctcctaccagatgaccctgacaagaagccacaggccaaacagcta
cagacgagagcagactacctcatcaagttactgagcaaggacctggccaaaaaagaagca
cagaaacaagcagggacagctaattcacggaagaggaaaccaagaagtaagaaaagcaaa
actctgaagccaacgaagacggatgaagtaataaagagtccatcctcagatcccccatca
gacaagggctcagatgaggatgaggatgacgatgatgatgacgacatcaaggtggaaaag
gagacggcgccggtgaagcctccgagcagaccgagccgagcagacagggtggtgatgaag
gaagaggacgatgaggacgaggaggaggaggaggaagaggagcctgagcaggaggaggtt
tcttcatcgggggagagggagatcaaagagaaagaaatcaaaaaagaaggcaaaaaggaa
aagaaggaggaaagttgggacattaaagagacaaaggaaccaaaagagaaaaaagaagca
aagcctgtggaggccgtgaacaaacaagaggaaaatgctgacaagaatgaggtaaaaact
gaggcacgagaatggacaaagaaagcctctgatgttccagtgcacataacagcaagtgga
gagaatgtgcccatatctgaggagtcggaggagctggaccagaggacctttagtgtgtgt
aaagagaggatgcggccggtgaaagcagccctgaagcagctggacaggccggagaaaggg
ctgtcggagcgcgagcaactggaacacaccagacagtgcctcatcaagatcggggaccac
atcactgagtgtctgaaggaatattccaatcctgatcagatcaaacaatggaggaaaaac
ctgtggatatttgtttccaaattcaccgagtttgacgccaggaaactacataaactttat
aagcatgcaatcaaaaaaagacaagagaatgcccaggcgatggaacagaacactagaagt
ctaagtacccacggctataaacatgcagacgctgaccggctgaaggacaactcgcaccag
gacgagagcagcagggacagctacagctcagaacggcaccagtctacgggtcggtaccat
gagaacagcggcggcaaggagagacacatcaccgattcccacaggaagacttcaggagga
gagtcccggaaaagaccatattcctccttcagcaatggcaaagaccaccgagacagagac
cactacagaccagacagcagggacagggaccgggacagagatcgagacagagatagagac
agacaagacagatactacaatgacagcaagcacaggaagctggaggatttccgctccagc
agagaccaccggctggacgtgaaggattattcccactctgaccagcgctctacttaccgc
taccactcagactggcagaacgagcagcgagcctcggccagcggaccccgctctccccga
gaccagcgctcgccgtacgacgcccgctcgcccttcgactactcgtcggaccacaagagc
acacccgagcagatctggagcagccgcaagacataa
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integrated database retrieval system
