Streptomyces alfalfae: A7J05_35805
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Entry
A7J05_35805 CDS
T05110
Name
(GenBank) RNA polymerase subunit sigma
Organism
ssia
Streptomyces alfalfae
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Gene cluster
GFIT
Motif
Pfam:
AbfB
Sigma70_r2
Motif
Other DBs
NCBI-ProteinID:
APY91390
UniProt:
A0A1P8TUR9
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Position
complement(8385633..8387150)
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AA seq
505 aa
AA seq
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MDTDQVRLVVAAQRGDQRARDELVSAYLPLLYNIVGRALSGHADVDDVVQETLLRAVRDL
PALRAPESFRSWLVSITLRQINTYWQRQRTLADRTTLLDEALPVPDAAAPLEDTTILRLR
MSEERGQAVEASRWLDPEHRVLLSLWWQECAGLLSRQDIAAASGLGVSHTGVRLQRMREQ
LDLSRTIVTALAADPRCPGLSATVSGWDGVRTSVWRKRIARHTRDCARCTATAAERVPTE
LLLSGLTPLAVPAALLGALVAKGLLSGTTVATTATASATGGAAGGGALLGKLHAVTAHPV
AALATGAVLVTGTATYVAWPEPEHRAPGATAAPTAGTTTRTPSVTRAPSKAPAPPTTSVP
SATPSPSGPAVVPLGVRSLESVDRPGQFLAYDGDFATLSSGAATFTVSKGLADSRCVTFR
ATDGRYLRHHYLRLRLSADDGSRLFREDATFCPRPGTVDGSVTLHAHNYPGSALRPRDGS
IRLDGSNGTRTFTGQASFVVRAPQR
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggacacggatcaggtgaggctggtcgtcgcggcgcagcgcggtgaccagcgggcgcgc
gatgaactcgtttccgcgtatctgccgttgttgtacaacatcgtgggacgggcactgagc
ggccacgccgacgtggacgacgtggtccaggagacgctgctgcgcgcggtacgcgatctg
cccgcgctgcgggccccggagagcttccgttcgtggctggtgtcgatcacgctccggcag
atcaatacgtactggcagcggcagcgcacactcgccgaccggaccacgctcctcgacgag
gcgctccctgtgccggacgccgccgcccctctggaggacacgacgatcctgcggctgcgc
atgtcggaggagcgcgggcaggcggtcgaagcgagccgttggctcgacccggaacaccgg
gtgctcctgtcgctgtggtggcaggagtgcgccgggctgctcagccgccaggacatcgct
gctgcgtcaggtctcggcgtctcccacacaggggttcgcctgcaacgcatgcgcgagcag
ctggacttgagtcgcacgatcgtcaccgcgctggcggccgacccgcgctgtccgggcctg
agcgcgacggtctccggctgggacggtgtgcgaacgtccgtgtggcgcaagcggatcgct
cggcacacacgcgactgcgcgagatgtacggcgacggcggccgagcgtgtgccgaccgag
ttgctcttgtccggcctcacgccgctggccgtgccggcggcgctcctcggggcgctggtc
gcgaagggcttgctgtcgggtacgacagtggcgacgacagcgaccgcgagcgccacgggt
ggggcggcagggggcggcgctctgctgggcaagctccacgcggtgaccgcccatccggtc
gcggcactcgccaccggcgcggtgctcgtcaccgggaccgccacgtacgtcgcctggccc
gaaccggagcaccgggcgcccggtgccaccgccgcgccgacggccggtacgaccacccgg
accccttcggtcaccagggctccgtcgaaggcccccgcgcccccgaccacctcggttccg
tcggccacgccgtcgccatcgggtccggccgtggttccgctgggtgtgcggtcccttgag
tccgtggaccggcccggccaattcctcgcgtacgacggtgacttcgcgacgctcagcagc
ggtgctgccaccttcaccgtcagcaaggggctcgccgacagccggtgtgtcaccttccgg
gcgaccgacggccggtatctgcgccaccactacctgcggctgcgcctgagcgccgacgac
ggcagccggttgttccgggaagacgccaccttctgcccgcgccccgggacggtcgacgga
tcggtgactctgcacgcgcacaactacccgggatccgccctgcgcccccgcgacggatcg
atccgcctcgacggctccaacggcacgcgtaccttcaccggccaggcctctttcgtcgtc
cgcgcgcctcagaggtga
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