Sclerotinia sclerotiorum: SS1G_03342
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Entry
SS1G_03342 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SS1G_03342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssl03400
]
SS1G_03342
Enzymes [BR:
ssl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
SS1G_03342
DNA repair and recombination proteins [BR:
ssl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
SS1G_03342
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_N
DNA_ligase_A_M
DNA_ligase_A_C
BRCT_2
BRCT
RNA_ligase
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
5491742
NCBI-ProteinID:
XP_001595253
UniProt:
A7EDF2
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MASSQQNKNKKPSPEAIADDERQYTYSTISKEELNDKYPDRPRNHGKTLPFHELFQSLFD
PLEANKNKKPGPAAARKKLGPHGPNTLSPNEIRKNIIVRFMSRWRSEVGDDFYPALRLII
PEKDRDRAMCYEVLSKRPMRQKVGDMTIGEANEMLDKLALAQKEEHQLPIFREFYQKMNA
EELVWLIRMILRQMKIGASEKTFLNLWHPDGEALFNVSSSLRRVCWELTDPNVTLEADET
GVELMSCFQPQLAQFMSNSFEKMVEKMCAQNPRDKGNGSEFWIEEKLDGERIQMHMEEDD
DIPGGRRFIWWSRKGKDYTYLYGNGFEDDNSALTRHMKNAFDPRVSSIILDGEMITWDPV
TNKMVAFGTLKTAAISGGKDPFSATAARPVFKVFDCLSEQVDVSLSSCKQRTHTNHKIGA
NPMKCFSFFKVGGGFNADDYAAIRHQTDGKWIKWDAKSPPTEFIELAGSHQEKERPDVWI
KPDDSIVMEVKAASVSISDSFRTNFTLRFPRFKRLRPDKDWKSALSIEGFMELKAKVEEG
EDDEFQVDKKKRNSKRLKRDKVIAGTEDDGKVLYEGPTTGVFEGMDFCILSDMILPVKKS
KAELETIIKNNGGRIYQSPSAKEDIIVIADKRVVKVASLIKSGKINIVKPQWVLHAVAQM
EIDAKLGRSRFVIPYETGHMLFTREENKESIAANSDQYGDPYCRDVGPEELRGIMDGMDL
NIDIRIAMNHFQFACGVFLHGEDGDTHVQKEDVTHIIFGDVSSERIRETKRELSGRTPHL
VSWKWIRDSWDTETRLDENGYLVEL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagtcaacagaataaaaacaagaagccaagtcctgaggctatagctgacgat
gaacgtcaatatacatatagcaccattagtaaagaagagcttaacgacaaatatccagat
cgtcctcgtaatcatggaaaaacattaccattccacgaattatttcaatctctcttcgat
cctcttgaagccaacaagaataaaaagccaggtccagccgctgcgcgaaagaaattagga
ccacatggacctaatactctttctcctaatgaaatacgaaagaatatcatcgtccgattt
atgtcgagatggcgcagcgaagtgggcgatgatttctaccccgcgttacgacttatcatt
cccgaaaaagatcgcgatcgagctatgtgctatgaggttttgtcgaaacgacccatgcga
cagaaggttggagatatgactattggggaggctaatgagatgcttgacaaacttgctttg
gcgcaaaaggaggaacatcagttgcctatctttcgggaattttatcagaagatgaatgcg
gaggaattagtatggttgattcgaatgattcttcgacagatgaaaattggtgcttcagaa
aagacttttcttaatctctggcatccagatggagaggcgctttttaatgtttcttctagt
ctccgtcgagtctgttgggaacttacggatcccaatgtcaccttagaagctgatgagacg
ggcgtggaattaatgtcatgtttccaaccccaactcgcacaattcatgtcaaattcattc
gagaaaatggtggaaaaaatgtgtgcccaaaatccccgcgataagggcaatggttcagaa
ttttggattgaggagaaattagacggcgaaagaatccagatgcacatggaagaggatgat
gatattccaggaggtcgccgttttatctggtggtctagaaagggtaaagattatacgtat
ctctacgggaatggttttgaggatgacaattcagcactgacaaggcatatgaagaacgcg
ttcgatccaagagtaagtagtattatattagacggcgagatgatcacatgggatcctgtt
acgaataagatggtggcatttggcactctgaaaactgccgcaatatcaggaggaaaggat
ccattctctgctacagcggctaggcccgtcttcaaagtcttcgactgcttatcagaacag
gtagatgtttccctctcctcgtgtaaacaacgaacacatactaaccacaagataggagca
aaccccatgaaatgtttttcattcttcaaagtaggtggtggattcaacgcagatgactat
gccgccatccgccatcaaaccgatggaaaatggataaaatgggacgccaaatccccacca
accgaatttatagaattagcaggctcacatcaagaaaaagaacgcccagatgtctggatc
aaaccagatgattctatcgtcatggaagtcaaagctgcatcagttagcatatcagattcc
tttcgcaccaatttcacacttcgctttccgcgctttaaacgtttgcgtccggataaagat
tggaagagcgctctttcaatcgagggattcatggaattaaaagcgaaggttgaggagggg
gaagatgatgaatttcaagttgataagaaaaagagaaattctaagagactgaagagagac
aaagttatcgcgggtactgaagacgatggcaaagtattgtatgagggacctaccacaggc
gtgtttgagggcatggacttttgtatcttgagcgatatgattctaccagtcaagaaaagc
aaggcggaactagaaacgattattaagaataacggcggtcgaatctatcaatcacctagc
gcgaaagaagatatcatagtcattgccgacaaacgcgtcgtcaaagtcgcctcgctaatc
aaaagcgggaaaataaatatcgtgaaaccacaatgggtattacatgcagttgcgcagatg
gaaatagatgcgaaattgggaagatctagattcgtcatcccgtatgagacgggccatatg
ctttttacgagggaagagaataaggagagtattgcggcaaattcagatcaatatggagat
ccttattgccgggatgtggggccggaagagttaaggggtattatggatgggatggatctt
aacatcgatattaggatcgcgatgaaccacttccaattcgcatgcggtgtgtttttgcac
ggagaagatggagatacacacgttcagaaggaggatgttacgcatataatctttggggat
gtttcgtcggagaggattcgggaaaccaaaagggaattgagcgggaggacaccgcatctc
gtgagctggaaatggatccgagattcttgggatacagagacgaggctggatgaaaatggt
tatttggtggaactatga
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