Sclerotinia sclerotiorum: SS1G_05823
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Entry
SS1G_05823 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03082
ATP-dependent chromatin remodeling
ssl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SS1G_05823
03083 Polycomb repressive complex
SS1G_05823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssl03036
]
SS1G_05823
Enzymes [BR:
ssl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
SS1G_05823
Chromosome and associated proteins [BR:
ssl03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
SS1G_05823
HDAC complexes
Sin3A-HDAC complex
SS1G_05823
BRAF-HDAC complex
SS1G_05823
REST complex
SS1G_05823
SHIP complex
SS1G_05823
MiDAC complex
SS1G_05823
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
SS1G_05823
Heterochromatin formation proteins
Other heterochromatin formation proteins
SS1G_05823
Chromatin remodeling factors
NuRD complex
SS1G_05823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
5488940
NCBI-ProteinID:
XP_001592901
UniProt:
A7EKH6
A0A1D9Q4P9
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MSNSFAPLDPVSNGPSTKKRVAYFYDSDVGNYAYVAGHPMKPHRIRLAHSLIMNYGVYQK
MEIYRAKPATRHEMTQFHTDEYIDFLQRVTPDNMDSFAKEQGKYNVGDDCPVFDGLFEFC
GISAGGSMEGAARLNRSKCDIAINWAGGLHHAKKSEASGFCYVNDIVLGIIELLRFKKRV
LYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGELRDIGVGQGKNYAVNFPLRD
GIDDVTYKSIFEPVIQSVMDYYQPEAIVLQCGGDSLSGDRLGCFNLSMRGHANCVQFVKS
FNKPTLVLGGGGYTMRNVARTWAFETGVLVGKEMDPVLPYNEYYEYYGPDYELDVRASNM
ENANSKDYLEKIKIQVIENLKRTAHAPSVQMQDVPRTTLAGTTDEDDDILADADEDENMD
VRHTQHRNDKHIARDDEFDEADEEEANLANGAFAQNGQAKQRNHTYSDVDMDSGVPTPEI
EIHDEIEDAPIAVTEANAQVNAELMEQKTQDATPTDTLEVGPSNAPSLSNSPKPVVDNEG
DIDMTEPLDAQAVPEKSEKSPASPAASVKANIATNIEAVASNAETVPETVAPKTEPVILK
QESDTERQDTDMTAEASEKVTEQAQS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattccttcgcgcctttagatccagtgtcgaatgggccaagcaccaaaaagagg
gtggcatacttctacgactcagatgtcggaaattatgcctacgttgcaggtcatcccatg
aaacctcatagaatacgattggcacatagtttgattatgaattatggagtttaccagaaa
atggagatttaccgagccaaaccagcaacccggcacgaaatgacacaattccataccgat
gaatacattgactttcttcagagagttactcccgacaacatggattcctttgcaaaggaa
cagggaaagtataacgttggagatgattgtcctgtcttcgatggactgttcgaattctgc
ggaattagcgctgggggtagtatggagggtgcagcccgactgaatcgttcaaaatgcgac
atcgcaatcaattgggctggaggattacatcatgcaaagaaaagtgaagcaagtggcttc
tgttatgtcaatgatattgtcctcggcataatcgagttgttgcgcttcaagaagcgagtt
ctctacattgatatcgatgttcatcacggtgatggtgtcgaggaagccttttataccacg
gatagagtgatgacagtttcgttccacaaatatggcgaatatttcccaggaactggtgaa
ctacgagatatcggtgttggacaaggcaaaaattacgcagttaatttcccacttcgcgac
ggtatcgatgatgttacttataaatccatctttgaacctgtcattcaaagtgtaatggat
tactatcagccagaagccatagttcttcaatgtggtggagacagtctttctggagaccgc
ttggggtgttttaatttgagcatgaggggccatgccaattgtgttcaatttgtcaaaagc
tttaacaagcccactttagtgcttggaggaggcggttacactatgcgtaatgttgcgcga
acttgggcatttgagactggtgttctagttggcaaggagatggatcccgtactcccttac
aacgaatattacgagtattacggccctgattatgagcttgatgttcgagcctctaatatg
gagaatgctaattcgaaagattatctcgagaagataaaaattcaagtcatcgagaatttg
aagagaactgctcacgccccatctgtgcaaatgcaagatgtaccccgtactactttagct
ggaacgaccgacgaagatgatgatattttagctgatgctgatgaagacgaaaacatggat
gttcgtcatactcagcatcgcaacgataaacatatagctcgggacgatgagttcgatgaa
gctgatgaagaggaagcgaaccttgcaaatggagcatttgctcaaaatggccaagcaaaa
caacgcaatcacacttactcggatgttgatatggatagtggtgttcctactccagagatc
gaaatccatgacgagattgaagatgctccaatagctgtcaccgaggccaatgcacaagta
aatgcggagcttatggaacaaaagactcaagacgcaacccccaccgatactcttgaagtg
ggcccatcaaatgccccatctctctcaaactcgcctaaaccggttgtggacaatgaaggc
gatattgatatgacggagccgctcgacgcccaggcagtcccagagaaatctgaaaaatca
cctgcatcgccggcagcctcggtcaaagccaatattgctacgaacattgaggcggtcgct
agcaatgctgaaactgtgcctgagacagtcgccccaaaaacagagcctgtaatattgaag
caggaaagcgacactgaaagacaagataccgatatgacagcagaagcaagtgagaaggtc
accgagcaagctcaatcatga
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