Sediminispirochaeta smaragdinae: Spirs_0832
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Entry
Spirs_0832 CDS
T01287
Name
(GenBank) transcriptional regulator, GntR family with LacI sensor
KO
K02103
GntR family transcriptional regulator, arabinose operon transcriptional repressor
Organism
ssm
Sediminispirochaeta smaragdinae
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssm03000
]
Spirs_0832
Transcription factors [BR:
ssm03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Spirs_0832
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
GntR
Peripla_BP_4
HTH_DeoR
HTH_11
RPA_C
HTH_41
TrmB
Rrf2
MarR_2
SQHop_cyclase_C
PaaX
Motif
Other DBs
NCBI-ProteinID:
ADK79967
UniProt:
E1RC87
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All DBs
Position
861271..862353
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AA seq
360 aa
AA seq
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MDSKIFNGTKKEMVRHYIKQILIDGTIGFGMRLPSENELVKKFQVSRQTIRQAFSDLANE
GLIYKQQGKGTFSKYRKNARQKQAIAVITTYISEFVFPGIVSGIEDVLSDKGYMMLLANT
NNSKEKEAEYLRNVMEHNVVGVIIEPSKSAQGNINLQIFNEMSKKGIKFVFINAYYPDFD
SSYIVMDDQKGAYIVVEHLLQRGHRRIACVYKTDDRQGVDRKSGYLQALDSYGVEIDNSL
IGEYDTAGMYLFPYMFAQSVLRSDNPPTAFTCYNDQSALMVIQAIKDSGLRFPEDVSVVG
YDDSIEVLSQDIGITTIKHPKRDMGVQGARFIIDMIEGRMKRPQYVYKPDLIVRDSCRNL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
ttggacagcaaaatatttaacggaacgaaaaaggagatggtcaggcactacatcaagcag
atattgattgatgggaccattggatttggaatgcggctcccttcggagaatgagctggtg
aagaaattccaggtcagccgtcagacaatccggcaggccttcagtgatcttgccaacgag
gggcttatttacaaacagcaggggaaggggactttcagcaagtatagaaagaatgcaagg
cagaagcaggctatcgccgttattaccacatatatttccgagtttgtttttccgggaatt
gtttccggtattgaagatgttctatctgacaaaggttacatgatgcttcttgcgaataca
aacaacagcaaggaaaaggaagctgaatatcttaggaatgtcatggaacacaatgttgta
ggcgttatcattgaaccgtcgaaaagcgctcaaggaaatattaacttgcagattttcaat
gaaatgagcaagaaaggcataaaatttgtgttcatcaatgcatattatccggatttcgac
agttcctatatcgttatggatgatcaaaagggtgcttatatcgttgttgaacaccttctt
cagcggggacaccggcgaatagcctgtgtttacaagaccgacgataggcaaggtgtggac
agaaaaagcggctatttgcaggctttggatagttacggtgtggagatagataattcactg
attggagagtatgacaccgccggaatgtatctgtttccttacatgtttgcccagtcggtg
cttcgttcagacaacccgccgacagcctttacgtgttataacgaccagagcgcacttatg
gttatccaagcaataaaggacagtggtttgaggttcccggaagatgtttcggttgtcggt
tatgacgattcgattgaggtcctgtctcaggatataggaatcactacaataaagcatcct
aaaagggatatgggagttcagggggcaagattcattattgatatgattgaaggccgtatg
aagaggccgcagtatgtttacaagcctgatcttatcgtacgggattcatgtagaaatctt
tag
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