Sediminispirochaeta smaragdinae: Spirs_1114
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Entry
Spirs_1114 CDS
T01287
Name
(GenBank) ROK family protein
Organism
ssm
Sediminispirochaeta smaragdinae
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ROK
HTH_11
HTH_24
GntR
HTH_28
HTH_23
RPA_C
MarR
HTH_Tnp_ISL3
Rrf2
Sigma70_r4
HTH_29
HTH_IclR
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
ADK80244
UniProt:
E1R0Z5
LinkDB
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Position
complement(1171865..1173085)
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AA seq
406 aa
AA seq
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MKTTEHGNKPKNIRSKNKKLIVELYRSKEMLSVSSIAQKIHLSRTTVMKINEDLLQEGII
VAAGKGSSTDEGGKKPSLYRFNAQNKLIISLHIKYDRIHFRLSDLTYKSLKKDEISIREN
EVFPEIAKKMKILIERNSSPEERQSTFLACMVAIHGNVDSESGICIHSTYFPSWGTYNNL
KEQLTPVLGLDCPIYLDNWIRYKAYGESKIGLAKNYDTVVLIDAGWHGVTSGILIGGKIY
AGKHFLSGEIGHSLINPQETELCACGSSGCFEQQISEKRVLTRVRTLLEHYPGSTLAKEG
KGLGLLSVFDAADEGDSLARTVLDEVINWFAIAISNIIMFFDPEIILIEGEYASKCRYME
KGIDKRVWELALPRLTRQTALLFSDGQSVPTLKGAAILGVDKFYTM
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgactgagcatggaaacaagcccaagaatattcgatcaaagaacaaaaaactg
attgttgagttgtatcgcagtaaagagatgctatcggtctcatcaattgcacaaaaaatc
cacctgagccgtacgaccgtcatgaaaattaacgaagatcttctgcaagaagggattatc
gttgctgcgggtaagggctcttcaacggacgaagggggaaagaagccctcgctgtaccgt
ttcaatgctcagaataagctcatcatttcgcttcatataaaatatgatcgaattcatttt
cgtctctctgatcttacctataaaagcctgaaaaaagacgaaatatccatacgggaaaat
gaggttttcccggaaatcgcaaaaaaaatgaagatattgattgaaaggaacagcagtcca
gaggagcggcaatccacgttccttgcctgcatggtggcaattcacggcaatgtggattcg
gaaagcggcatctgcatccattcaacctatttcccatcatggggaacctacaataatcta
aaagaacagcttacccccgtgcttggtttggactgtcccatctatcttgacaactggata
cgctataaggcgtatggggagagcaagattggtcttgcaaaaaactacgataccgttgtg
ctgatcgacgcaggctggcatggggtcacttcaggaatcctcatcggagggaaaatttat
gctggtaagcattttctctccggcgagataggacacagcctgattaatccgcaggagaca
gaactttgtgcctgtggaagttccggctgtttcgagcagcaaatatcggaaaaaagagta
ctcaccagggtacgcacattactggagcattacccgggctccacattggctaaagaaggt
aaaggattgggtctgctttccgttttcgatgctgccgacgaaggtgattctctggccaga
accgttttggacgaggttattaattggtttgcgattgcaatctccaatatcattatgttc
ttcgatcccgaaatcatcttgatcgagggtgaatacgcctcaaaatgtcgctacatggaa
aagggaatcgataagcgagtatgggaactcgcccttccccgcctaacacgtcaaacggct
ttgctattcagcgacggacaatcggttcctaccctcaagggtgcggcaatcctcggagtc
gataaattttatacgatgtaa
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