Sediminispirochaeta smaragdinae: Spirs_1198
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Entry
Spirs_1198 CDS
T01287
Name
(GenBank) extracellular solute-binding protein family 1
KO
K10117
raffinose/stachyose/melibiose transport system substrate-binding protein
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spirs_1198
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_1198
Transporters [BR:
ssm02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
Spirs_1198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
ADK80327
UniProt:
E1R2P5
LinkDB
All DBs
Position
1261155..1262444
Genome browser
AA seq
429 aa
AA seq
DB search
MKRVCLVVMVSLLCVPFLIAGGNQEAERAAEGQIVIKTMAYGNNSNPEGVNWVRIVKAFE
EQNPDIKIDYELLYDEAYHQKVVARLASGDIPDLAYMGADARWGAPWKEAGQQFDHRDYI
DSDFYDLNLIPPMGPKGEVFEIPLGTSNITTVLYMNEKLVTSLGFSAPQTYEDIVAMVPA
AKAAGLDVISIDGADGWAWNSCLMSMVAARLSGNPRWVSEAVQGKHRFDDPVFVDSLAFI
TKMIDDGVLSSKSVLIDYGANVSKFSNEQALFMIQGQWVAGEIPPEVADHTKLLAWPKLP
GEKPETAGSVAAAIQVGYGLTKQGGSDPAVREAALKFLRYFYSVEESTQRLRDGLIVAPI
LKNYQVPEDLPSIMKSKVALAQTAMNTDVIDAYVSGNALEALNSGMQQIASGSATAEEIA
AKVESLIQR
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagtatgtctggttgtaatggtttccctcctgtgtgtcccgtttttgattgcg
ggcgggaatcaggaggcagagagagccgccgaagggcagattgtgattaagacgatggct
tacggtaataactcaaaccctgaaggggttaactgggttcgtatcgtgaaggcctttgag
gagcagaatcccgacatcaagatcgactatgaactgctgtacgatgaggcgtaccatcag
aaggttgttgcccggcttgcctccggtgatattcccgatcttgcctacatgggtgcggat
gcccgttggggagccccctggaaagaggccggtcaacaattcgaccaccgcgattacatt
gacagcgatttctatgatctcaatttgattcctcccatgggaccaaaaggtgaagtcttc
gagattcccctcggaaccagcaacattaccacggttctctatatgaacgaaaagttggtt
acatcccttggcttttccgctccccaaacctacgaagatatcgttgctatggttcctgcg
gcaaaggcggccggtttggatgtgattagcatcgatggtgccgacggctgggcctggaat
tcatgcctgatgtccatggttgccgcccgactttcgggaaatccgcgttgggtctccgaa
gctgttcagggaaaacatcggtttgacgatccggtatttgtcgattcccttgcctttatc
accaagatgattgatgacggagtcctttcttccaaatcggtactgatagactatggtgcc
aatgtatctaagtttagtaatgaacaggcccttttcatgatccaggggcagtgggtcgca
ggggaaatcccgcccgaggttgccgatcatacaaagctgcttgcctggcccaagctcccc
ggagaaaaacccgaaaccgccggttctgttgcggcggcaattcaggttggttatgggctg
acaaaacaaggcggaagtgaccctgccgttcgtgaggctgccctcaaattcctgcgctac
ttctacagcgtcgaagagtcgacccagcgtctgcgtgacggtttaattgtcgctccaatt
ctgaagaactatcaggttcccgaagatcttccttcaatcatgaaaagcaaggttgccctt
gctcagaccgcaatgaataccgatgtcatcgatgcctacgtaagcggtaatgcgcttgag
gccctgaattccggtatgcagcagattgcaagcgggtcggccacggctgaagagatagca
gcaaaggtcgaatcacttatccagcgctaa
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