Sediminispirochaeta smaragdinae: Spirs_1355
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Entry
Spirs_1355 CDS
T01287
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00470
D-Amino acid metabolism
ssm01100
Metabolic pathways
ssm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Spirs_1355
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Spirs_1355
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssm01011
]
Spirs_1355
Enzymes [BR:
ssm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
Spirs_1355
Peptidoglycan biosynthesis and degradation proteins [BR:
ssm01011
]
Precursor biosynthesis
Racemase
Spirs_1355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
ADK80482
UniProt:
E1R460
LinkDB
All DBs
Position
1443857..1444972
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AA seq
371 aa
AA seq
DB search
MRPTKARIDLDLYRHNIRVISKKTGGRKICLVVKANAYGHGSVKMAKVGIEAGAQALGVA
TVDEALELREAGIAAPIFLFTVADVSEVPQLVRFDIIPFVSDLAYIKQIEREAQNQEKVA
MVHLKVDTGMGRLGCRPEEALSLASFVGNSKNLMMGGLCTHFSLSDISDRAYTLLQINRL
NLLVDTLRSQHIPYGLVHAANTGAIIQYPEAYYDMVRPGLGIFGYPPDLIHMGRDRADLR
PVLSMETKIGLIKTIKKGESVSYGRTFVAENDTHIGVVAAGFCDGYPRSLSNKGFVTIKG
KHYPVIGMVCMDQLIVDLGRDLQVDPDDTVVLLGHGRNEPTMVDLTQRGNIIVNEVICRI
PARVPKVYINE
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcctacaaaggcccgtatcgatttagatctgtatcgtcataatattcgagtcatt
tcgaagaaaaccggcggcaggaagatctgtctggtggtcaaagcaaatgcatacggccac
ggctccgtaaagatggcaaaggtcggtattgaggccggtgcacaggctcttggtgttgct
accgtggatgaggctcttgagcttcgggaggccggaattgcggcacctatctttctattt
acggtagccgacgtttccgaggtcccccagctcgttagatttgacattattccctttgtc
tccgatttggcatacatcaaacagattgaacgagaagcccaaaaccaggaaaaagtggct
atggtccatctcaaggttgataccggtatgggacggctgggttgtcgacccgaagaagct
ttgtctctggcaagctttgtcggtaatagtaaaaaccttatgatgggagggctctgtacg
catttttccctttcggatatctctgatcgtgcttatacgcttttacagattaataggctt
aacctacttgtagatactcttcggtcccagcatatcccttatgggcttgtgcatgctgcg
aacaccggtgcgattattcagtatccggaggcttattacgacatggtaaggcctggtctg
ggtatctttgggtatcctcccgatcttatccatatggggagggatagagcagatcttaga
ccggttctgtccatggagacaaagatcggactcattaagacaataaaaaagggtgagagt
gtctcctatgggagaacatttgttgctgagaacgatacgcatatcggtgtcgtagcggcc
ggtttctgcgatggctacccaagaagtctctcaaataaaggatttgtcacaatcaaggga
aaacactatccggttatcggaatggtctgcatggatcaattaatcgttgatcttggtcgg
gatctgcaggtagacccggacgatacagtggtcttactgggccatggccgtaatgaaccg
acaatggtcgaccttacccagaggggtaatatcatcgttaatgaagttatttgtcgaatt
cctgcaagagttcccaaggtctacatcaatgaataa
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