Shigella sonnei Ss046: SSON_0564
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Entry
SSON_0564 CDS
T00274
Symbol
ybdS
Name
(GenBank) putative membrane protein
KO
K09477
citrate:succinate antiporter
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SSON_0564 (ybdS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssn02000
]
SSON_0564 (ybdS)
Transporters [BR:
ssn02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SSON_0564 (ybdS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_sulph_symp
CitMHS
Motif
Other DBs
NCBI-ProteinID:
AAZ87331
ShiBASE_China:
SSO0564
UniProt:
Q3Z4I1
LinkDB
All DBs
Position
complement(604120..605583)
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AA seq
487 aa
AA seq
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MSLAKDNIWKLLAPLVVMGVMFLIPVPDGMPPQAWHYFAVFVAMIVGMILEPIPATAISF
IAVTICVIGSNYLLFDAKELADPAFNAQKQALKWGLAGFSSTTVWLVFGAFIFALGYEVS
GLGRRIALFLVKFMGKRTLTLGYAIVIIDILLAPFTPSNTARTGGTVFPVIKNLPPLFKS
FPNDPSARRIGGYLMWMMVISTSLSSSMFVTGAAPNVLGLEFVSKIAGIQISWLQWFLCF
LPVGVILLIIAPWLSYVLYKPEITHSEEVATWAGDELKTMGALTRREWTLIGLVLLSLGL
WVFGSEVINATAVGLLAVSLMLALHVVPWKDITRYNSAWNTLVNLATLVVMANGLTRSGF
IDWFAGTMSTHLEGFSPNATVIVLVLVFYFAHYLFASLSAHTATMLSVILAVGKGIPGVP
MEQLCILLVLSIGIMGCLTPYATGPGVIIYGCGYVKSKDYWRLGAIFGVIYISMLLLVGW
PILAMWN
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagcaaaagataatatatggaaactattggccccactggtggtgatgggtgtc
atgtttcttatccctgtccccgacggtatgccaccacaggcatggcattacttcgctgtg
tttgtggcaatgattgtcggcatgatcctcgagccaattccggcaacagcgatcagtttt
attgcggttactatttgcgttattggcagtaattacctgctctttgatgccaaagaatta
gctgacccagcgtttaatgcgcaaaaacaggcgctgaaatggggtctggctggtttttcc
agcaccacggtatggctggtatttggcgcatttatttttgcattagggtatgaagtttcc
gggttaggtcgtcgcattgcccttttcctggtgaaattcatgggcaaacgcacgctgacg
ttgggttatgcgattgtcattatcgacattctgctggcaccgtttacaccgtccaacacc
gcgcgtaccgggggtacggtttttccggtcattaaaaacctgccgccgctgtttaaatca
ttccccaacgatccgtccgcgcgtcgtattggcggctatttgatgtggatgatggtcatt
agtaccagtctgagttcgtccatgtttgtcaccggtgcggcaccaaacgtgctgggtctg
gagttcgtcagcaaaattgccggtatccagattagctggttgcagtggttcctctgcttc
ctgccggttggggttatcttgcttatcattgcgccgtggctttcctacgtgctgtacaaa
ccggaaatcacacacagtgaagaagtggcaacctgggcgggtgatgaactgaaaaccatg
ggtgcgctgacacgcagagagtggacactgattggccttgtattgctcagcttaggtttg
tgggtttttggcagtgaagtcattaatgctactgcagttggtctgctggcagtttcgcta
atgctggccctgcacgttgtgccttggaaagatattacccgctataacagcgcatggaac
acgctggtcaacctggcaactctggttgtgatggctaacggcctgactcgttctggcttt
attgactggttcgccggtaccatgagtacgcacctggaaggattctcaccaaacgcaacg
gtgattgtactggttctggtgttctactttgcacactacctgtttgccagcctgtctgcg
cacaccgcaaccatgctgtcggttattctggccgtcggtaaaggtattccgggcgtacca
atggaacaactgtgtatcctgctggtgctgtctatcggtatcatgggctgtctgacgccg
tatgcaaccggtcctggggtgattatttacggctgtggctatgtgaaatcaaaagattac
tggcgtcttggcgcaatcttcggggtgatttacatctctatgttgctgttggttggctgg
ccgattctcgccatgtggaactaa
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