Saccharolobus solfataricus P2: SSO0001
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Entry
SSO0001 CDS
T00054
Name
(GenBank) Hypothetical protein
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
sso
Saccharolobus solfataricus P2
Brite
KEGG Orthology (KO) [BR:
sso00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
sso02048
]
SSO0001
Enzymes [BR:
sso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
SSO0001
Prokaryotic defense system [BR:
sso02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
SSO0001
Subtype I-B factors
SSO0001
Subtype I-C factors
SSO0001
Subtype I-D factors
SSO0001
Type II CRISPR-Cas system
Subtype II-B factors
SSO0001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
RE_TdeIII
PDDEXK_3
Motif
Other DBs
NCBI-ProteinID:
AAK43340
UniProt:
Q97TX9
Structure
PDB
LinkDB
All DBs
Position
249..857
Genome browser
AA seq
202 aa
AA seq
DB search
MITEFLLKKKLEEHLSHVKEENTIYVTDLVRCPRRVRYESEYKELAISQVYAPSAILGDI
LHLGLESVLKGNFNAETEVETLREINVGGKVYKIKGRADAIIRNDNGKSIVIEIKTSRSD
KGLPLIHHKMQLQIYLWLFSAEKGILVYITPDRIAEYEINEPLDEATIVRLAEDTIMLQN
SPRFNWECKYCIFSVICPAKLT
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgataactgaatttttacttaaaaagaaattagaagaacatttaagccatgtaaaggaa
gagaatacgatatatgtaacagatttagtaagatgccccagaagagtaagatatgagagt
gaatacaaggagcttgcaatctctcaggtttacgcgccttcagctattttaggggacata
ttgcatctcggtcttgaaagcgtattaaaagggaactttaatgcagaaactgaagttgaa
actctgagagaaattaacgtcggaggtaaagtttataaaattaaaggaagagccgatgca
ataattagaaatgacaacgggaagagtattgtaattgagataaaaacttctagaagtgat
aaaggattacctctaattcatcataaaatgcagctacagatatatttatggttatttagt
gcagaaaaaggtatactagtttacataactccagataggatagctgagtatgaaataaac
gaacctttagatgaagcaacaatagtaagacttgcagaggatacaataatgttacaaaac
tcacctagattcaactgggaatgtaaatattgcatattttccgtcatttgcccagctaaa
ctaacctaa
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