KEGG   Salvia splendens (scarlet sage): 121778453
Entry
121778453         CDS       T07627                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121778453
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sspl03019]
    121778453
   03041 Spliceosome [BR:sspl03041]
    121778453
Messenger RNA biogenesis [BR:sspl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     121778453
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     121778453
Spliceosome [BR:sspl03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    121778453
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM_2 Ish1
Other DBs
NCBI-GeneID: 121778453
NCBI-ProteinID: XP_042031742
LinkDB
Position
19:complement(5432743..5435478)
AA seq 386 aa
MDYSGAPRNGAGYDEELPHYGRFYEPEGGNYGVNDNIDVSTRLKHDSSSSDGKLFVGGIA
WETPKESLSLYFSRYGEITNCVIMYDKISGRPRGFGFVTFADPEVAEKVLEENHVIDGRA
VEVKRTVPRENVQVRGGGGSGTKKIFVGGLPVTLTEDDLREYFSSYGNVVGHQIMLDRET
GRSRGFGFVTFDNEDGVERVLSNGRMHELGGKQVEIKRAEPKRSGFDGSSQSQPRHGGSS
SNPPVNSIDVSEGGYAGGYGVKMGGAYGGYGSYGNMAGNYAGGALGFYPGYGGYGYGYGS
GAPFYSGSAYGGGGFGVSVGYNRSAGYGMHNGYSGGAAAAGGDEEGFESNGSDGVNGANV
SGSEYGSGRGYGNGDGKNGRFHPYRK
NT seq 1161 nt   +upstreamnt  +downstreamnt
atggattacagcggcgctccacggaacggtgccggatatgacgaagagctgccgcattat
ggaagattttacgaaccagaagggggaaactacggtgtgaatgataatatagatgttagt
acaagattaaagcatgattcttcttcgtctgatggaaagcttttcgttggaggcattgct
tgggagacgccgaaagaatcactgagcttgtacttcagtagatatggagaaattacaaat
tgtgtcataatgtacgataaaatctctgggagaccacgtggttttggatttgtgacattt
gcggatccggaggttgctgaaaaggttttagaggaaaaccatgtcattgatggaagagcg
gttgaagtaaagagaactgttcccagagagaatgtgcaagttcgtggtggaggaggctca
ggtacgaagaaaatttttgtgggcggtcttccagtgacactgactgaagatgatttgaga
gagtacttttcttcttacggtaatgttgtcggccaccaaattatgctggatcgagagact
ggtagatctcgtggctttggctttgttacttttgataatgaagatggtgttgaaagggta
ctctcaaatggtcgaatgcatgaacttggaggaaagcaagttgagataaagagggctgag
ccaaaaagatctggttttgatggttcgagtcaaagccagcctcgccatggtggcagtagt
tcaaatcctcctgttaactctattgatgtttcagaggggggttatgcaggtggctatgga
gttaagatgggtggagcgtacggtggctatggtagctatggaaatatggccgggaattat
gctggtggagctttagggttttatccggggtacggtgggtatggttatggttatggatcc
ggtgccccgttctacagtggtagtgcatatggtggcggtggatttggagtttcggttggt
tataaccgatctgctggttatggcatgcataatggatacagtggtggcgctgctgctgct
ggtggagacgaagaaggctttgaaagcaatggcagcgatggagtgaatggtgcaaatgtt
tccggcagtgaatatggcagtggtagagggtacggcaacggtgatggaaaaaatgggagg
tttcatccctaccggaagtga

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