Salvia splendens (scarlet sage): 121784736
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Entry
121784736 CDS
T07627
Name
(RefSeq) uncharacterized protein LOC121784736 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121784736
Spliceosome [BR:
sspl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121784736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_16
Motif
Other DBs
NCBI-GeneID:
121784736
NCBI-ProteinID:
XP_042038888
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All DBs
Position
21:complement(7647877..7655508)
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AA seq
1148 aa
AA seq
DB search
MAAPTSAAANLTISLSEKVSNVISGCPQDYNAWRSLISELETASPGTYYQYYVLPQLTNE
FELQEDINTISLAYESFLSRFPLCHWHLEKYAYQKAKFCNSQEAVDIYERAVEVAMYSVG
FWSDYFTFAAACFESPGDIRRLFERAISFVGKDYFCHVLWDKYMKYEFSQEGWSFLAQSY
IWALRFPTKKLQLYYDNFKHFVANLEEEIGYEKNDSIVDQISVPCAAMELSKDEIALVIK
DMLDSSNRTLKSKALDRYRYIGEEFYLEACRMDGKVKRFESRIQRRFFDVTPLDDDQLIN
WHLYLDFIEKEDNLDRTMKLYERCLIPCARYPEFWIRYVEFLESKGGRELAISALARATQ
IFLKTVPEIHLFDARFKEHIGDAHGARAALALCDPKTDSNFIESIAAQANLERRLGNFAA
ASATYEKALKKPREKQKPRLLPTLYLHFSRLTFLTTGSTAACRDVLIEGIQQVPHCRSLL
EELVKFAMIHEGASHLNIINSVIADAISPGLDENEGLDAKDRENLSCLFLEFVNLCGTLH
DIKEAWNRHVKLFPQSLRLKTLSKHPAPGSYPIGSTRDKKGKYDHHVLSRPSTNRCNQLH
GEEQLPESPVPLVDQSSNTKEKLQLLSTKEVLSNVDESRDSEPATVSCQSREDRLGPMVV
AAEFSDHATGNALTVCDSGRDFSSQSRGDVPGPMDVSAELGMQSKEDEVGKSIDTTESIE
ACQSSLPNVQPELDHELNQSKFPASSDHNSLKSQEKESRELIPMTCDEYETSPKSIHSVD
SLKVHGESERDGSVSLQNNAPREVHHPGEPSSTRGDSAEIDHVVQAPEHASSWFQEQNQA
QDRELKLQQSPFIGRHKLVKNQGSGRRSQSEVGAVADDKATEQDEPVTNQHNAQKFPARQ
QRSQSEDRATDLDQQMDTLTSPTSISMSGGQQPVSYAQQNMNPAAPTTQQQWQEQQSLAM
NQMMLQYHYQQQQLLQQQYQQQLQMQHPYYQMQQQYLTQQPYQVQPSLQQQQSQIQQGCE
PHLNPQQAHDTQYQQPQGATYQVQQLAYQQHLSQEQQQLLWQQQYQQYQLLQHQQQQQQQ
GSMNTQGHNVHHDPPRQPDEQLHKYHQPHPQHKFTQHMNQNRQGTPDYAAVRPSSSPRVG
ARSPQVSQ
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgccgacctccgccgctgcaaatttgaccatcagtctttctgagaaagttagc
aatgtaatttctggctgcccgcaagactacaatgcctggcgatcgttgatttcggagctt
gaaactgcatctccgggaacatattatcaatactatgtcctgccccagttaacaaatgag
tttgaactgcaggaggatataaatactatttcccttgcatatgaatcctttttgtcaaga
ttcccattgtgtcattggcatttggagaaatatgcttatcagaaggcaaagttttgcaac
tctcaagaagctgttgatatttatgagcgagcagtggaagtggcaatgtattcagtcggt
ttctggtctgattatttcacatttgctgcagcttgttttgaatcccctggggatattcgg
cgattgtttgaaagagccatctcatttgttggaaaggattacttttgccatgtcctatgg
gacaagtacatgaaatatgaattcagtcaggaggggtggagctttcttgcacaaagttac
atctgggcattgaggtttccgacaaagaagctgcagttgtattatgacaacttcaagcat
tttgttgcgaatttggaagaggagattggatatgaaaaaaatgacagcatagtagatcaa
atatctgttccttgtgctgcaatggaattatctaaggatgaaattgctcttgtcatcaag
gatatgctagattcttccaatagaaccctcaaatccaaagcgctggatagatatagatat
attggtgaagaattctatctggaagcatgccgcatggatggtaaagtaaaacgttttgag
tcaaggatccaaaggcgtttttttgatgttactcctctcgatgatgaccaattaattaat
tggcatctatacctggatttcattgagaaggaagacaatttggaccggaccatgaaactc
tatgaaagatgcttgattccttgtgcccgttaccctgaattctggatacgatatgtggag
ttcctggaatcaaaaggaggacgtgagctggctatttctgccctagcccgggccactcaa
atatttttaaagactgtaccagaaattcatttatttgatgcaaggtttaaggagcacata
ggagacgcccatggtgctcgtgctgcattagctctttgtgatccaaaaactgattccaat
ttcattgaaagcattgctgcacaagctaacctggaaagacgtctggggaactttgcagca
gcttctgccacatatgagaaagcacttaaaaaaccaagggagaagcagaagccacgcctt
cttcccactctgtatttgcacttttcccgccttacattcttgacaacaggtagcactgct
gcttgtagagatgtattaattgaaggtatacaacaggtgcctcattgcagatccctttta
gaggaattagtaaaatttgcaatgattcatgaaggagcaagccatctcaacatcataaat
tcagtcatagcagatgcaatttcacccggattagatgaaaatgaaggtttggatgccaaa
gatcgagagaacctgtcatgcttgtttttagagtttgtcaatctttgcgggactttgcat
gatataaaagaggcatggaatcgtcacgtcaaattattcccccagtcgctaaggttaaag
acgctgtctaagcaccctgcaccgggcagttacccaataggttcgaccagggataaaaaa
gggaagtatgaccaccatgtgcttagccggccatccacaaaccgttgcaaccaacttcat
ggggaagaacagttacctgaatctcccgtacctcttgtggaccaaagcagcaacaccaag
gaaaaactgcaactgctgtcgaccaaagaagttttgtctaatgttgatgaatctcgagac
agtgaaccagctacagtttcctgccagtctagagaagacagactggggcctatggttgtt
gctgctgaattttctgaccatgctacggggaatgctttaactgtgtgtgattcaggccgg
gatttctcgtcccaatctagaggagacgtaccagggccaatggatgttagtgctgaatta
ggtatgcagtctaaagaagatgaggttgggaagtcaatagacacaactgaatcaattgaa
gcatgccaatctagtttacccaatgttcaaccagagttggatcatgagctcaaccagtcg
aagtttccagcttcgtcagaccataattcattgaagtctcaggaaaaggaatctcgggag
ttgatccccatgacttgtgacgagtatgagactagtccgaagagcattcattcagtcgac
tctctcaaagtccatggtgaatctgaacgagatggatcagtgagccttcagaataatgca
ccaagggaagtgcatcatccaggggagccttctagcacccgcggtgactcagctgaaata
gatcacgtggtccaagctcccgaacatgcatcgtcatggttccaagagcaaaaccaagct
caagatcgggagcttaagttacaacaatctcccttcattggtcgccataaattagtaaaa
aatcaaggtagtggaagacgcagccagtcggaagtaggggcggttgcggatgataaagca
actgaacaagatgagcctgtcacaaatcaacacaacgctcagaagtttcctgctagacaa
cagcgtagccagtcggaggatagagcaactgatctggaccagcaaatggataccttgaca
tctcctacttcgatcagtatgtctggaggacagcaaccggtttcttatgctcagcaaaac
atgaatccggctgctccaacgactcagcaacaatggcaagaacaacagagcttggccatg
aaccagatgatgttgcagtatcattaccagcagcagcaattactgcaacagcagtatcag
cagcagctgcaaatgcagcatccctactatcagatgcagcaacagtatctaacccagcag
ccatatcaagtgcagccgtctctacagcagcaacagtcacagatacagcaaggttgcgag
cctcatctgaatcctcagcaggcacatgatacccaataccaacaacctcagggcgccact
taccaagttcagcaactggcgtatcaacagcacttgtcgcaggagcaacagcagcttctt
tggcagcagcagtaccagcagtatcagcttctgcaacaccagcagcagcaacagcagcaa
gggtctatgaatacgcaaggacacaatgtgcatcacgatccaccaaggcagccggacgaa
caactgcacaaatatcaccaaccccatccacaacataaattcactcaacatatgaaccaa
aatcgacagggtacaccagattatgcagcagtcagaccttcttcgtctccacgtgttggt
gctcgatcaccacaagtttcacaatag
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integrated database retrieval system
