Salvia splendens (scarlet sage): 121786087
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Entry
121786087 CDS
T07627
Name
(RefSeq) cyclin-dependent kinase D-3-like
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03022
Basal transcription factors
sspl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121786087
09124 Replication and repair
03420 Nucleotide excision repair
121786087
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sspl01001
]
121786087
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121786087
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121786087
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121786087
Enzymes [BR:
sspl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
121786087
2.7.11.23 [RNA-polymerase]-subunit kinase
121786087
Protein kinases [BR:
sspl01001
]
Serine/threonine kinases: CMGC group
CDK family
121786087
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
121786087
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
121786087
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
121786087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
121786087
NCBI-ProteinID:
XP_042040547
LinkDB
All DBs
Position
22:20725338..20730090
Genome browser
AA seq
420 aa
AA seq
DB search
MADMDQLLTKKVADRYLKREVLGEGTYGVVYKAIDTKTGQVVAIKKIRLGKQKEGVNFTA
LREIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIVLSPADIKSYIQ
MTLKGLSICHKKWVLHRDMKPNNLLIGPAGQLKLADFGLARIFGSPDRRFTHQVFARWYR
APELLFGAKQYGPGVDVWAAACIFAELLLRRPFLQGNSDIDQLGKIFAAFGTPKASQWSD
MVYLPDYVEYQHVPGQTLRTLFPMASDDCLDLLGKMFMYDPKARISAQQALEHRYFSSIP
PPTEPALLRRPPPKKEPANPKASEFNPLDGPTVLSPPRKQRRVMPQREGFDVNAHNTIKM
DDHGNETKQAAGERSEHAPMSLDFSVFGMRPPNRPTINSADRSHLKKKLDLEFQLPEEEE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatggatcagctgttgaccaagaaggtagccgatcgttatctcaaacgcgaa
gttctcggtgaaggtacatatggtgtcgtttacaaagccatcgatactaagactgggcaa
gtagttgctatcaagaaaattcgtttggggaagcagaaggaaggtgtcaatttcacagct
ttaagagaaattaagttgctcaaagagcttaaggatcctaacatcatcgagttgattgat
gcattccctcacaaggggaacttgcaccttgtgtttgagttcatggagacagatctcgaa
gctgttattcgtgatagaaatattgttctttctccagctgacatcaagtcatacatccag
atgacactgaaggggctttccatttgccataaaaaatgggtcctgcatagggacatgaaa
ccgaacaacttgctgattggacctgctggacaacttaaacttgcagattttggtttagct
cgtatatttggaagccctgatcgaaggttcacacatcaggtttttgctagatggtacaga
gctcccgagcttctgttcggtgccaagcaatatggtccaggggttgatgtatgggccgca
gcatgcatatttgctgagctgcttttacgtcgaccttttctgcagggaaacagtgacatt
gatcaactaggaaaaatattcgcggcttttgggacgccaaaggcatcccaatggtcagat
atggtctatcttccagattatgtggaatatcagcatgtgcctggtcaaacactgcgtaca
ttgtttcccatggctagtgatgattgtttggaccttttagggaagatgttcatgtatgat
cctaaagcaagaatttcagcacagcaggctctggagcataggtatttttcttccatacct
ccacctacagaacctgctttgcttcgaagacctccgccaaagaaggaaccggccaatcca
aaagcctcagagtttaatcctctggatggaccaacagtgctgtctcctcctagaaaacaa
agaagagtcatgcctcaacgtgagggctttgatgtgaatgcacacaatacgatcaagatg
gacgaccatggcaatgagacaaagcaggcagccggggagaggagtgagcacgctccaatg
tctttggatttttcagtttttggcatgaggccaccaaatagaccaactattaacagtgct
gacagatcacatctaaagaagaaactggatcttgaatttcaactacccgaagaagaagaa
taa
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