Salvia splendens (scarlet sage): 121804359
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Entry
121804359 CDS
T07627
Name
(RefSeq) TNF receptor-associated factor homolog 1b-like isoform X1
Organism
sspl
Salvia splendens (scarlet sage)
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Gene cluster
GFIT
Motif
Pfam:
MATH
Motif
Other DBs
NCBI-GeneID:
121804359
NCBI-ProteinID:
XP_042059779
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Position
5:complement(4307459..4316947)
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AA seq
1188 aa
AA seq
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MTGVATGEAGAGRSFEGVSTGQQQPRCQSGEAIAEWRSSEQVENGSPSTSPPYWDSDDDD
DGGPKPSDLFGKYTWKIEKFSQINKRELRSNAFEVGGYKWYILIYPQGCDVCNHLSLFLC
VANHDKLLPGWSHFAQFTIAVVNKDPKKSKYSDTLHRFWKKEHDWGWKKFMELSKVLDGF
IDADNLIIKAQVQVIRERADRPFRCLDCLYRRELVRVYLTNVEQICRRFVEEHREKLGKL
LKDKATWSSFCAFWLGIDQSSRRRMSREKSESILKVVVKQFFIEKEVTSTLVMDSLYSGL
KALEGQNKGKKSKGKYLEAEELPVPIVGIEKDTFILVDDVLLLLERAAMEPLPPKDEKGP
QNRTKDGTVGEEVNKDSIERDERRLTELGRRTIEIFVLAHIYSKIEVAYQEAVALKKQEE
LIREEEEKSRRGVDKEKKSKKKQAKQKKNNRKGKDKVKDDKPGCTVHDMIEQDSSSAERI
EIAAEPETVLEKPDAVEDASDASDSVDGVPEILLPDSDDRDVSPVKSDTNTSEVYPPTGA
PGSVIRGLPTEQNGTEGRPLSAVDDSSSNCSSDSVLSVRSGPQKGNSYDKNIKSPSRGRN
NHSKKTSGTCEWVNEEPRQPFEAVQNARNPNDTSRVPNGAEQPSQAAGQSLQEKVRNGNV
QKAGKKVEETGSLHNISKTKDDVEVEAPGDNGARVTSSPKSPSNGTLLAAPVKVDTRSNA
SVSQVLVKKTSSNSPKQAVNPVLSVNSSENTPISKPVSQKFATLRPTDKPAGYQRHTVNE
KILTQEVIETAQQKPAASKPAEKPSGNQKPVGTEKLSSHELPVTSDKPSIPPIPVMSRPL
SAPLVAGPRPTVSLVSMVQTAPVLARSVSAAGRLGPESTAYGSQNYVPQSYRNAMMGGPS
AGSSSTYSHNHSASSVVNTSHSYSQAPTLVSAPLLPSHSSDRIDTNPTKPSLSFGMLNNH
DNMLQNGTMWMDRPQRGVDGNRNLHRDHNSLASELHGLELNGTINSRSQDQLPSEYPACT
SGRLSNHVLPDEFPHLDIINDLLDDGHGVGMSSRMNSDYQMFSSAPHHINRQYTFPGDPN
MSGGAGPSASACRFDRTRSYHDDGYQHSYGTPGRSYDTLRDMVPPGSSRPYANGQADGYM
ASQWQMSGSDPQLLRNTDSDGYSYHLPEYQNLSAGINGYTVFRPSNRP
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgactggagttgcaactggtgaggctggagctggaagatcatttgaaggggtttcaact
gggcaacagcagccacgatgtcagtctggggaagcaatagctgaatggaggtcttcagag
caggttgaaaatgggagtccatctacttcgcccccgtactgggacagtgatgacgatgat
gatggaggaccaaagccatctgatttattcggaaagtatacttggaagattgagaaattt
tctcaaatcaacaaaagagaacttcgtagcaatgcatttgaagttggaggctacaaatgg
tatattttgatttatccacaaggctgcgatgtctgcaatcatctttctttgtttctttgt
gttgcaaatcatgacaagcttcttccagggtggagtcactttgcgcagttcacaattgct
gttgtgaataaagatccaaaaaagtccaaatattctgatacattacatcgtttttggaag
aaggaacatgactggggatggaagaaatttatggagctatcgaaggtgctagatggattt
attgatgctgataatttgataattaaagctcaagttcaggttattagggagagagccgat
cgaccttttcgttgccttgactgtctgtatcggagggaacttgtaagagtgtatttaacg
aatgtcgaacagatttgtcggcgttttgtggaagaacatagggaaaaactcggaaagcta
ttaaaggataaagctacatggtctagtttctgtgctttctggttgggtattgaccaaagt
tcccgccgccgtatgtcccgagagaagtcagagtccattctaaaagtagttgtgaaacaa
tttttcatagaaaaggaggtgacatccactcttgtcatggattctttgtatagtggtttg
aaagcccttgaaggccagaataaaggtaaaaagagtaagggcaagtatttagaggcagaa
gaattaccagttcctatagttggcattgagaaagatacgttcattttggtggatgatgta
ttgctactgctagagcgggcagctatggaacctttgcctccaaaggatgagaagggtccc
caaaatcgtactaaggatgggactgtaggagaggaggtcaacaaagattctattgaacgt
gacgagaggagacttactgaattgggtagacgaactattgagatatttgtattggcccac
atatacagtaaaattgaggtggcataccaagaggccgttgccctcaagaagcaagaagaa
ctcatccgtgaagaggaggaaaaatccaggcgaggagttgataaggaaaaaaagtctaaa
aagaaacaggcaaaacagaaaaagaataaccgaaaagggaaggataaagtgaaggatgac
aaaccaggctgcactgtccatgacatgattgagcaagatagttcttcagctgaaagaata
gaaatagctgctgagccagaaactgtacttgaaaaacctgacgcagttgaagatgcatct
gatgcatctgattctgtagatggtgttcccgaaatactcctacctgattctgacgataga
gatgtcagtcctgtcaaatcggatacaaatacttctgaagtgtacccccccacaggagcg
ccgggcagtgtgattagaggtcttcctactgagcagaatggcacagaaggaagacctcta
tctgctgtagatgatagctcttcaaattgttcctctgactctgtgctttctgttagaagt
gggccacagaaaggcaattcatatgataaaaacataaaatctcctagcagagggaggaac
aaccatagcaagaagacttctggcacatgtgagtgggttaatgaagaacctaggcaacca
tttgaagctgttcaaaatgcaaggaacccaaatgacacatctcgagttccgaatggtgct
gaacagccatctcaggctgctggccagtctttgcaggagaaggtgagaaatgggaatgtg
cagaaagcagggaaaaaggttgaagaaactggttccctgcataacatttcgaagactaaa
gatgacgttgaagttgaagcacctggggataatggtgcgcgtgtaacttcctcgcccaag
agcccttcaaatggaacactactagctgctccagtgaaggtggatacaaggagcaatgct
tcagttagtcaagtcctggtcaagaaaacatcctcaaatagtcctaaacaagctgttaac
cctgtactttcagtgaattcatctgaaaatactcccatatcaaaacctgtatctcaaaag
tttgctaccttaagacctactgacaagcctgctggatatcaaaggcacactgtgaatgag
aagattctgacacaggaagtgattgaaactgcccagcagaagcctgcagcctcaaaacct
gccgagaaaccctctggaaatcagaaacccgttggaactgaaaagctttcctcacatgaa
ttgcctgtcacgtccgacaagccctccattccgccgatacccgttatgtcaagacccttg
agtgcccctctagtagctggtcccaggcctacagtttccttggtttcgatggtgcaaaca
gcaccagtgctggcgcgatcagttagtgctgctggtcgactgggccccgaaagtactgca
tatggatcacagaattatgttcctcagtcctatcgaaatgctatgatgggtggtcctagt
gctggaagttcatctacctattctcataatcattctgccagttcagtggtaaatacatca
cattcttactcacaagcacccactcttgtatcggcgccactgcttccctcccacagctcc
gatagaatcgatactaatccgacaaagccgagcctctcatttgggatgttgaataatcat
gataatatgttgcagaatgggactatgtggatggatcgccctcagaggggagtggatggt
aacagaaatctacatcgtgatcataattccctggcgagtgagcttcatggtcttgaattg
aatggtacaattaatagcagatctcaggaccaactcccatctgagtacccagcctgcacg
tcgggccgcctaagcaaccatgttcttcctgatgagttcccacacctcgacatcatcaac
gacttgcttgatgacggtcacggagttggaatgtcgtccagaatgaactctgactatcaa
atgttcagcagcgcgccccatcacatcaacagacagtataccttccctggcgaccccaac
atgtcaggtggggctggtccgtcagcaagcgcgtgcagatttgacagaacaagaagttat
cacgacgacgggtaccaacatagttatggcacgcccgggagaagttacgacacactcagg
gatatggtcccaccgggtagttctcggccttatgcaaatggacaggctgatggttacatg
gcgagccagtggcagatgtcgggttcggatccacagttgttgaggaacacggacagtgat
ggctattcctatcatttaccagagtatcagaacctcagtgctggcatcaatggctacaca
gtattcagaccttcaaatcgaccttga
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