Streptomyces spinosirectus: LXH13_21860
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Entry
LXH13_21860 CDS
T08958
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
sspn
Streptomyces spinosirectus
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Gene cluster
GFIT
Motif
Pfam:
NPCBM
Sigma70_r2
zf-HC2
Sigma70_r4_2
Sigma70_ECF
DUF5114
Motif
Other DBs
NCBI-ProteinID:
UIR19520
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Position
complement(4716420..4718399)
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AA seq
659 aa
AA seq
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MSFDGRDGSPGDGDAEADGPPQVPSQGGRAGTPRGGDPAETVIPPQGGVPIESVGPFEPV
GPVDSVGPGDSAEGVVPAQRDRHEDGVLPPPRDMPPSDADLIVRMRSGDDTAYEELYRRH
ADAVRRYARTCCRDAHTADDLTAEVFARMLQAVRGGHGPEHAVRAYLLTSIRRVAANWTK
SARREQLVDDFALFAAQSARSSEVADDDTLDLGADVRAMHEAEQSMAMQAFRSLPERWQA
VLWHTEVEDESPSEVATLFGLDANGTRVLASRAREGLKQAYLQAHVSASLASDEECARHA
DRLGAYARGGLRTRAERGLRKHLEECAKCRLAAGQIKEVAGGIPAVVPVAVIGWFGAAGY
AKVAALIAGGTGAGAAGAAGAAAAASGGSSGSTGAGGAAASEGLGAPVKVGLAATAVAVA
AGVALALALSGSHAPAKKEDAKPPVSVPSVRPNPSTPTPEKKSPEPKPPVVPAKAPEPTP
TPTPTPTPKPKPTPTPTPAPDPKPTPTPTPTPPPPPAVYQWSELAYDVSGDGTRPEMRLG
ESSWVWQRYGMSIGGTQYAHGVTVHGDSSVTIDLNRTCTAYDAMVGVDDMTLGLGKVSFS
VYADGVPLWRSGPVRGGESAVPVHVNLAGHHTVRLAVRPDSSFDSLTVADWAESKFTCS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgacgggcgggacggttcgccgggcgacggtgacgcggaggccgacggcccg
ccgcaggtgccgagtcagggcggccgagcaggcacgccgcggggcggtgaccccgcggag
accgtcattcccccgcaaggcggcgtgcccatcgaatccgtcggacccttcgaacccgtg
gggcccgtcgactcggtgggccccggcgactccgcggagggcgtcgtcccggcgcagcgc
gaccggcacgaggacggggtgctgcccccgccgagggacatgccgccgtccgacgccgat
ctgatcgtgcggatgcgttcgggcgacgacaccgcgtacgaggagctgtaccggcgccac
gcggacgccgtgcgccggtacgcccgtacctgctgccgtgacgcccacaccgcggacgac
ctcacggccgaggtcttcgcccgcatgctccaggcggtgcgcggcgggcacggccccgaa
cacgccgtacgcgcctacctgctcaccagcatccggcgcgtggccgcgaactggaccaag
tccgccaggcgcgagcaactggtcgacgacttcgcgctgttcgccgcgcagtccgcacgc
tcctccgaggtcgccgacgacgacacgctcgacctcggcgccgatgtgcgcgcgatgcac
gaggccgagcagtccatggccatgcaggccttcagatcgctgccggaacgctggcaggcc
gtgctgtggcacaccgaggtcgaggacgagtcgcccagcgaggtcgccacgctcttcggg
ctggacgccaacggcacgcgcgtgctcgccagccgcgcccgcgagggcctcaagcaggcc
tacctccaggcccatgtcagcgcctcgctcgcgagcgacgaggagtgcgcccgccatgcc
gaccggctcggcgcctacgcccgcggcggcctgcgcacacgggccgagcgggggctgcgc
aagcacctggaggagtgcgccaagtgccggctggccgcgggccagatcaaggaagtcgcc
ggcggtatccccgcggtcgtgccggtcgcggtcatcggctggttcggcgccgccgggtac
gccaaggtcgccgcgctcatcgccggcggcaccggagccggtgcggcgggcgcggcggga
gcggccgcggcggcgagcggcggctcgtccgggagtacgggcgccggtggcgcggcggcc
tccgaggggctgggcgcgcccgtgaaggtcggcctcgccgccaccgcggtcgccgtcgcg
gcgggcgtggcactggccctcgcgctgtccggcagccacgcccccgccaagaaggaggac
gccaaaccgcccgtctccgtaccgtccgtgcgccccaacccgtcgacgcccacgcccgag
aagaagagccccgagccgaagccacccgtcgtaccggcgaaggcccccgagcccacaccg
accccgacccccacgccgactcccaagccgaagcccacccccacaccgacgcccgctccc
gacccgaagcccacccccacgccgaccccgactcccccgccccctcccgccgtctaccag
tggagcgagctggcgtacgacgtcagcggcgacggcaccaggcccgagatgcggctcggc
gagagcagctgggtctggcagcggtacggcatgtcgatcggcggcacgcagtacgcgcac
ggcgtcaccgtgcacggcgactcctccgtgaccatcgacctcaaccgcacctgcaccgcc
tacgacgccatggtcggcgtcgacgacatgaccctggggctcggcaaggtctccttctcc
gtctacgccgacggcgtcccgctgtggcggtccgggccggtacgcggcggagagtcggcg
gtcccggtgcatgtgaacctcgccggccaccacaccgtacggctggcggtccgcccggac
agcagcttcgacagcctgacggtcgcggactgggccgagtcgaagttcacctgctcatag
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