Streptomyces spongiicola: DDQ41_01090
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Entry
DDQ41_01090 CDS
T06937
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sspo
Streptomyces spongiicola
Pathway
sspo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DDQ41_01090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspo03400
]
DDQ41_01090
Enzymes [BR:
sspo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DDQ41_01090
DNA repair and recombination proteins [BR:
sspo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DDQ41_01090
RecFOR pathway proteins
DDQ41_01090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
DUF815
Mg_chelatase
nSTAND3
Sigma54_activat
AAA_3
RNA_helicase
AAA_14
Sigma54_activ_2
TsaE
AAA_19
Zeta_toxin
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AWK07744
UniProt:
A0A2S1YUF3
LinkDB
All DBs
Position
complement(267705..268781)
Genome browser
AA seq
358 aa
AA seq
DB search
MNRDNTAPTTDDADGRLVAASADGEDQAVEAALRPKSLDEFVGQERVREQLDLVLKAALA
RGATADHVLLSGSPGLGKTTLSMIIAAEMGAPIRITSGPAIQHAGDLAAILSSLQEGEVL
FLDEIHRMSRPAEEMLYMAMEDFRVDVIVGKGPGATAIPLELPPFTLVGATTRAGLLPPP
LRDRFGFTGHMEFYEPSELERVIHRSAQLLDVAIDTDGAAEIAGRSRGTPRIANRLLRRV
RDYAQVKADGRITREIAVAALGVYEVDGRGLDRLDRAVLQALLKLFAGGPVGLSTLAVAV
GEERETVEEVAEPFLVREGLLARTPRGRVATPAAWAHLGLVPPRQGSGGAGQPGLFGT
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccgggacaacaccgcaccgacgaccgacgacgccgacggcaggctcgtcgcggcc
tccgccgacggcgaggaccaggccgtggaggcggccctgcggccgaagtcgctggacgag
ttcgtcggccaggagcgcgtacgggaacagctcgacctcgtcctgaaggcggccctcgcc
cgcggtgccaccgccgaccacgtcctgctctccggctcgcccgggctcggcaagaccacc
ctctccatgatcatcgcggccgagatgggcgccccgatcaggatcaccagcggcccggcc
atccagcatgcgggggacctcgccgccatcctgtcctccctccaggagggcgaggtgctg
ttcctcgacgagatccaccggatgtcgcggcccgccgaggagatgctctacatggcgatg
gaggacttccgcgtcgacgtgatcgtcggcaaggggcccggcgccaccgcgatcccgctg
gagctgcccccgttcaccctggtcggtgccaccacccgggccgggctgctgcctcccccg
ctgcgcgaccgcttcggcttcacagggcacatggagttctacgagccgtccgagctggaa
cgcgtcatccaccgctccgcccagcttctcgacgtggcgatcgacacggacggtgccgcg
gagatcgcgggccgctcccgcggcacgccccgtatcgccaaccggctgctgcgccgcgtc
cgggactacgcgcaggtcaaggcggacggccggatcacccgggagatcgcggtggcggct
ctcggcgtgtacgaggtggacggccgcggcctcgaccggctcgaccgcgccgtgctccag
gccctcctcaagctcttcgccggcggcccggtcggcctgtcgaccctggccgtggccgtc
ggggaggagcgggagaccgtcgaggaggtcgccgagcccttcctcgtccgggagggtctg
ctggcgcgtaccccgcgcggccgggtggccactccggcggcatgggcgcatctcggcctg
gtgccgccccggcagggttccggcggcgctggacaaccgggtctgttcgggacgtga
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