Streptomyces spongiicola: DDQ41_11445
Help
Entry
DDQ41_11445 CDS
T06937
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
sspo
Streptomyces spongiicola
Pathway
sspo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DDQ41_11445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspo03021
]
DDQ41_11445
03400 DNA repair and recombination proteins [BR:
sspo03400
]
DDQ41_11445
Enzymes [BR:
sspo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DDQ41_11445
Transcription machinery [BR:
sspo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DDQ41_11445
DNA repair and recombination proteins [BR:
sspo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DDQ41_11445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AWK09434
UniProt:
A0A2S1YZ86
LinkDB
All DBs
Position
complement(2644536..2644808)
Genome browser
AA seq
90 aa
AA seq
DB search
MSSSITAPEGIINPPIDELLEATDSKYSLVIYAAKRARQINAYYSQLGEGLLEYVGPLVD
THVHEKPLSIALREINAGLLTSEAVEGPAQ
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctcttccatcaccgcgcccgagggcatcatcaacccgccgatcgacgagctgctc
gaggcgaccgactcgaagtacagcctggtgatctacgccgccaagcgcgcgcgtcagatc
aacgcgtactactcgcagctcggtgaagggctcctcgagtacgtcggtccgctggtggac
acccacgtgcacgagaagccgctgtcgatcgccctgcgcgagatcaacgcgggtctgctg
acctccgaggccgtcgagggcccggcccagtag
DBGET
integrated database retrieval system
