Streptococcus suis ST3 (serotype 3): SSUST3_0227
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Entry
SSUST3_0227 CDS
T01470
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sst
Streptococcus suis ST3 (serotype 3)
Pathway
sst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SSUST3_0227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sst03400
]
SSUST3_0227
Enzymes [BR:
sst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SSUST3_0227
DNA repair and recombination proteins [BR:
sst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SSUST3_0227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_12
UvrD-helicase
Herpes_Helicase
DEAD
AAA_22
SLFN-g3_helicase
UvrD_C
AAA_28
T2SSE
5_3_exonuc
nSTAND3
AAA_29
HHH
AAA
Motif
Other DBs
NCBI-ProteinID:
AEB80701
LinkDB
All DBs
Position
complement(216022..218511)
Genome browser
AA seq
829 aa
AA seq
DB search
MNEVYFTGTIDRIIFENPSNFYKILLLEIEETDADYDDYEIIVTGTIADVIEGEDYRFYG
NLVTHPKYGQQLQISRYERSKPTSAGLVKYFSSEHFKGIGRKTAEKIVELYGEDTIDKIL
AEPEKLTQITGLSSKNMQAFVEKLRLNYGTELILAKLAEYGIPNKLAFQIQDQYKEKTLQ
IIEENPYQLVEDVQGLGFTIADRIAENLGIASDSPQRFRVGMLFSLIHRSMETGDTYVEA
RDLLEATLELLEKSRHTELDPAAVAKELTGLIADDKVQQEGTKIFDNSLYFAEHGIHKNL
TRLMGKNGFKPFPRTDVEAAIAELETMSSLTYDDIQKEAIVQAITNPLFILTGGPGTGKT
TVINGIIAVYAILHKIDLTRNREECPVLLAAPTGRAARRMNELTGLPSATIHRHLGLVEG
QEESYRDDYLDADFIIVDEFSMVDTWLANQLFQNISSQTQVLIVGDAEQLPSVSPGQVLA
DLLKIDKLPSITLERIYRQSDDSTIVTLASQIRQGALPSDFREKKADRSYFEAQNEQIPA
LIERIVGAAIKSGIPANEVQILAPMYRGAAGIDQLNTMTQALLNPLEEGELEFLHNEQAF
RQGDRVIHLVNDAEANVFNGDLGYITDLLPAKYTDSKQDEITINFDGSEVTYPRNEWYKI
TLAYAMSIHKSQGSEFQVVILPITRTSHRMLQRNLVYTAITRSKSKLILLGEISAFDYAV
KNAGTVRKTYLVPRFQGEMAEQESKESLIKKDESKTATTTQTQPPTQPDRKEQVKVVKEN
NQQLSLLDQDQPKKTSPQPTEYILTVDNLLTIDPMIGIEQADIEEFFKA
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtgtattttaccggtactattgaccggattatttttgaaaatcctagtaat
ttttataaaatccttctccttgaaatcgaggaaactgacgctgactatgacgactacgaa
attattgtgaccggaacgattgccgatgtcattgaaggagaagactatcgtttttatggc
aatctggtcacccatcccaagtatggtcagcagctgcaaatttcgcgttacgaacgcagc
aagcctacctcagctggtctggttaagtatttctccagcgagcatttcaagggaattgga
cgcaaaacagctgaaaaaatcgttgagctctatggcgaagataccattgataagatttta
gctgaacctgaaaaactaacccaaatcacaggcctatccagcaagaacatgcaggcattt
gtcgaaaaactccgcctcaattatggaaccgagttgatcttggcaaaactagccgagtat
ggcattcccaataaattggcctttcaaatccaagaccagtataaggaaaaaacacttcag
attattgaagaaaatccctatcaactggtcgaagatgtccaggggctcggctttaccatt
gccgataggattgcggaaaacctgggaattgccagtgattcaccccaacgttttcgggtt
ggcatgctctttagtctcattcatcgctccatggaaacaggcgatacctatgtggaggcc
agagacttgctggaagcaactcttgaactgctggaaaaatcccgccatacagagctggac
cccgctgctgttgccaaagaattgacgggactgattgcagacgacaaggtacagcaagaa
ggcacaaagatttttgacaacagcctctactttgccgaacatggtatccataaaaacttg
acccgcctgatgggaaaaaatggtttcaaacccttcccacgcacagacgttgaggctgct
atagcagagctggaaactatgtcttccctgacctacgatgacattcaaaaagaagccatc
gtccaagccattaccaatccgcttttcattctgacaggcggaccagggactggaaagaca
accgttatcaacggtattatcgcggtctatgccatcttgcataagattgacctgactcgc
aaccgagaagaatgcccagtcctcctagccgctccaactggacgagcagccagacggatg
aatgaattgacaggtttgccttccgccaccatccaccgccatctcggtctggtagaagga
caggaagaatcctaccgtgatgattatttggatgccgactttatcatcgtggatgagttt
tctatggtagatacttggttggcaaaccagctcttccagaatatctcctcccagacccaa
gttctgattgtcggcgatgccgagcaattgccttctgtcagccccggtcaagtacttgct
gacctcttgaaaattgacaagctgcccagcattactctagaacgtatctatcgtcaatcc
gatgattcgaccattgttaccctagccagccagattcgacagggtgctctgcctagcgat
tttcgtgagaaaaaggctgaccgttcctattttgaagcccagaatgaacaaattccagcc
ctgattgagcgcattgtcggcgcagccatcaagtcaggtattcctgcaaacgaggtacag
atcctcgctcccatgtaccgtggggccgcaggcatcgaccaactcaacactatgacccag
gccctgctcaatccactggaagagggagagttagaattcctgcataacgagcaagccttc
cgccaaggcgaccgggtcattcatttagtcaacgatgccgaggccaatgtcttcaatggt
gatttaggctacatcaccgacctccttcctgccaagtacaccgactccaagcaggacgaa
attaccatcaacttcgacggtagcgaggtcacctatccccgaaacgaatggtacaagatt
accctggcctatgccatgtccatccacaagtcccaaggcagcgagtttcaggtagtcatc
ctccccatcacccgcaccagccaccgtatgctccagcgcaatctggtctacaccgccatc
acccgctccaagagcaagctcatcctcctgggcgaaatctccgccttcgactacgccgtc
aaaaacgccggcaccgtccgaaaaacctatctggtcccacgtttccaaggggaaatggca
gagcaggaaagcaaggaaagcctgattaaaaaagacgaaagcaaaacagctacaaccacg
caaacccagccccctactcagccagacagaaaagaacaggttaaagtagtcaaagaaaac
aaccaacaactctcccttcttgatcaagaccagccaaaaaaaacaagtccccaacccaca
gaatacattttgactgtagacaacctactaaccatcgaccccatgattggcatagaacag
gcagatattgaagaattttttaaagcataa
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integrated database retrieval system
