Solanum stenotomum: 125844403
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Entry
125844403 CDS
T08385
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125844403
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125844403
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125844403
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
Prok-RING_4
zf-C3H2C3
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
125844403
NCBI-ProteinID:
XP_049379676
LinkDB
All DBs
Position
11:41011331..41023414
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AA seq
445 aa
AA seq
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MMNLWVFWYLSVVCLSGCKVLGNVVLVGKNETLSFEDIEANFAPSVRGSGKCGTLYVAEP
LDACLTLTNKDEPVKNSTHDLFLLIIRGGGCSFEDKVRQAQAAGFKAAIIYNDEYGDLVA
MAGNSAGVQIPAVFVSRVSGERLTKYAGDIDVEIWIIPSFENSAWSIMAISFISLLAMSA
VLATCFFVRRHRIRRDRPRASRVREFHGMSSRLVKAMPSLIFTSVLEDNCTSVTCAICLE
DYIVGDKLRILPCRHKFHAMCVDAWLTSWRTFCPVCKRDARTSNGEPPASESTPLLSSSL
ASLSSLSSLRSSVASSSAIQIGQGASRSPSVSRPLSISSTPYNHQSLQSYHQSTHLSISR
SSLDLQNASSQRSRASYLISPHSLGYPSLSPLNSRYMSPYIPSPGNASSSYIGSSSRHPN
PLRHSESTTSFSPFASAQSLPGCES
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatttgtgggtattttggtacttgagtgttgtttgtctttcgggttgtaaagtt
cttggtaatgtggttttggtaggaaagaatgaaactttatcgtttgaagacattgaagct
aattttgctccctcagtgaggggatcaggcaaatgtgggacattgtatgtggcagagcct
ttagatgcctgcttgactttgactaacaaggatgaaccagttaaaaatagcacccatgat
ctattcttgctgataataaggggtggtggatgtagttttgaagataaagtcagacaagcc
caggccgcaggtttcaaggcagccattatctacaacgatgaatatggtgatctagttgca
atggcaggaaactctgctggtgtacagattcccgcggtgtttgtttctagagtttcaggg
gaaagactgacaaagtatgctggtgacattgatgttgaaatatggataatcccaagtttt
gagaactctgcctggtccatcatggctatatcattcatttcgttactagctatgtcagca
gtgcttgctacttgcttctttgtccgtagacatcggatacgaagagaccggcctcgggcc
tcacgtgttcgtgaatttcatggaatgagtagtcgtttggtgaaagctatgccaagcttg
atatttacatcagttttggaggataattgtacatcagtaacatgtgctatctgtcttgaa
gactatattgtgggagacaagcttagaattcttccttgccggcacaaatttcatgctatg
tgcgttgatgcgtggctcacatcatggagaacgttttgtcccgtctgtaaacgtgatgca
agaactagcaatggtgagccaccagcatcagaatctacaccattgctttcttctagtcta
gcttctttatcttcgttgtcatccctaagatcgtcagtagcttcatcatcagcaatacaa
ataggccaaggagcatcccgatccccttcagtttctcgtcctctatcaatttctagtact
ccttataaccaccagtcacttcagtcctaccatcagtcgactcatcttagtataagccgc
agttcacttgaccttcagaatgcgtcttcccagagatctcgtgcatcttatttgatttcg
cctcactcgttgggctatccttctctatctcctcttaattcaagatacatgtcaccatat
attcctagtccaggaaatgcctcgtccagttatattggctcctcaagtcggcatcccaat
ccactgcgtcatagtgagtcaaccactagcttttcgccatttgcttcagctcagtctctt
ccgggatgtgagtcgtga
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