Solanum stenotomum: 125848040
Help
Entry
125848040 CDS
T08385
Name
(RefSeq) protein argonaute 2-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125848040
03036 Chromosome and associated proteins [BR:
sstn03036
]
125848040
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125848040
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125848040
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
125848040
microRNA pathway
RISC loading complex
125848040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Spond_N
Motif
Other DBs
NCBI-GeneID:
125848040
NCBI-ProteinID:
XP_049383781
LinkDB
All DBs
Position
12:complement(29118113..29123345)
Genome browser
AA seq
998 aa
AA seq
DB search
MDRGNYQRGGGDNTGRGRGNRGRGGRGGPQMGSFQPPQQWGNQPRGSGQYQFRGAPHNHP
GRGGTWVNQPVQRGGPAWSRPPQQGSGVPSTAWARPPPQQPHQQGSGGGVATAWARPPPQ
KSQELGGGNQQQQVVDRPVPQSSDVVQVDLGSLKITEPSSSSLPESYKEKRVPVARPDTG
NIAVKSITLLANHFPVKFNLQTIIMYYDVDIQQQADENRPAKKLTNKFVLHMIREKLCAD
KPAEFPRDKTVYDGKKNIFSAVQLPTGCFTVNWSDGDDAMEHSYDVIIKLVAELQLWRLN
EYMSGNLTHIPRDILQGMDLVMKENPSRKRISVGRCFYSMNDKKDIGYGAAAHEGFQQSL
KPTAGGLALCFDYSILALRKPISVLDYLRQCLQKPNEVTFMNNHQTAQLALKGLKVTVIH
RRTSQKFLIKQLTDRKTSEITFPLEDPEGKNPPRDVLLVEYFRDKYQQEIQFKDFPSLDI
GKGNKKNYVPMEFCVLVEGQPYRKEGLYMSLARPQQRRDAICKMVEAEDGPCGRFTSNFE
IEVDSKMTSVLGRILPPPDLKLGSESRHHVNDKCQWNLVGKSVVEGKEIQRWALINLSHK
NHRDLKRQVDVFVGQLKDRNLKLGIKMEEPAVKHFRHMDELWTVGTVEKLLNDVVNEAGQ
KNKGELQMIVCVMASKDNGYKYLKWVSETKIGIVTQCCLSSNAYNNAKDQFLANLCLKIN
AKLGGSNMELMERLPNFGSEDNVMFIGADVNHPTGRDPDKYPSIAAVVATINWPAANKYA
ARVRPQKHRTEKILEFGSMCADLVNTYARLNSVKPNKIVVFRDGVSEGQFDMVLNEELND
LVEAIYDSNKYKPEITLVVAQKRHHTRLFPKEGNVPPGTVVDTQIVHPFDFDFYLCSHFG
QLGTSKATHYYVLWDDNGFNSDSLQKLIYNLCFTFARCTKPVSLVPPVYYADLVAYRGRM
FQEVLMEMNAPSSTTSSVSFEQSFYKMHKDLQNIMFFV
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtggaaactaccaacgtggtggcggcgataacaccggcaggggtagaggtaac
cgtggtcgtggtggaaggggtgggccccaaatgggttcatttcagcctccacagcaatgg
gggaatcagccaaggggatcgggtcaatatcagtttcgtggagctccgcataatcatccg
ggtcgtggtggtacttgggtcaaccaaccggttcaacgcggtggtcctgcttggtcacga
ccaccacagcagggtagtggcgtccctagcactgcttgggcccgacctccaccgcagcag
ccacatcaacagggtagtggcggtggagtagctactgcttgggcccgaccaccgccgcag
aagagtcaggaacttggtggtggaaatcagcagcagcaagttgtggatcgtcctgttcct
caatcttctgatgttgttcaagttgatctggggtccctgaaaattacagaaccaagttca
tcatcccttccagaaagttacaaggaaaaacgtgtacctgtcgcacgacctgatactgga
aatattgctgtcaagtcaattacgctgcttgctaatcattttcctgttaaatttaatctc
cagactatcattatgtattatgatgtggatattcaacagcaggccgatgagaatcggcct
gcgaagaagttaacaaacaagtttgttctccatatgataagagaaaagttgtgtgcggat
aagcctgctgaatttcctagagataaaactgtatatgacggtaagaagaacattttcagt
gctgttcaacttcctactgggtgtttcactgtgaactggtctgacggggatgatgctatg
gaacactcttatgacgttatcatcaagcttgttgctgaattacagctttggaggctgaat
gaatatatgagtggaaaccttacgcatattcctcgtgatatactacaaggaatggatttg
gttatgaaagaaaatccttctaggaaaaggatttctgtaggtcgttgtttctactctatg
aatgataaaaaagacattggttacggggctgctgcacatgaaggttttcagcagagccta
aagcctacagcaggagggctggcgttgtgcttcgattactcaatcttggcactccggaaa
ccaatttcagtgctagactatctgaggcaatgtcttcaaaaacctaacgaagttactttc
atgaacaaccatcaaactgcacaacttgcattaaagggtttgaaagtcacagtaattcat
cgtcgtacaagccagaagtttcttattaagcagctaactgatcgcaaaactagtgaaatt
acttttccccttgaagatccagaaggcaaaaatcccccaagggacgttcttcttgttgaa
tacttcagggataaatatcagcaggagattcagttcaaggattttccttcattagatatt
ggaaaaggtaataagaaaaattatgtcccgatggaattctgtgtcttggttgaggggcaa
ccgtatcgtaaggagggtttgtatatgtcactagctcgaccccaacagagaagggacgca
atttgtaaaatggtagaggctgaagatgggccgtgcggacgtttcacctctaattttgag
attgaagttgatagcaagatgaccagtgttctcggtcgtattcttcctccccctgatttg
aagctaggcagtgaaagtcgacatcatgtgaatgataaatgccagtggaaccttgttggg
aaatctgtggtggaaggcaaggagattcaacgatgggctttgataaatcttagccataag
aatcacagggacttgaagcgacaagttgatgtatttgttggccaattgaaagatcggaat
ttaaagttgggtattaaaatggaagaacctgccgtaaaacatttcagacacatggatgaa
ctctggacagttggtacggttgaaaaactcctcaatgatgtagttaatgaagctggccag
aaaaacaagggtgaacttcaaatgatagtttgtgttatggcatcaaaggataatggatac
aaatatcttaaatgggtctcagagaccaaaattggcattgtaacccagtgttgcttgtct
tctaatgcctacaacaatgcaaaggatcaatttcttgcaaacctctgtttgaagattaac
gcaaaacttggaggcagcaatatggaacttatggaaagactccctaatttcggaagtgaa
gacaatgtcatgttcattggagctgatgttaatcatcctactggcagggatcccgacaaa
tatccatccatagcagctgttgttgccaccatcaactggccagctgctaataaatatgcc
gctagagttcgtcctcagaaacacaggactgagaagattctagagtttggaagcatgtgt
gcagatctagtaaatacttatgctcgactcaactcggttaaaccaaacaaaattgttgtt
ttccgtgatggtgtgagtgagggtcagtttgatatggtactcaacgaagagttgaatgat
ttggtagaagctatatacgacagtaataagtataaaccagaaatcactcttgttgtggct
cagaagagacaccatacacgactatttcctaaggagggaaatgtccctccgggtactgtt
gtggatacacaaattgttcatccttttgattttgacttctatctttgcagccactttgga
cagttgggtactagtaaggcaactcactattatgttctatgggatgataatggtttcaat
tctgacagcttacaaaagcttatatacaacttgtgcttcacttttgcgcggtgcactaaa
cctgtctcacttgttccaccagtttattatgcagaccttgttgcttacaggggacggatg
ttccaagaggtgcttatggagatgaacgctcctagctctacaacttcatctgtttcattt
gaacaaagtttttataaaatgcacaaggatttacagaacataatgtttttcgtctga
DBGET
integrated database retrieval system
