Solanum stenotomum: 125851831
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Entry
125851831 CDS
T08385
Name
(RefSeq) protein argonaute 10-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125851831
03036 Chromosome and associated proteins [BR:
sstn03036
]
125851831
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125851831
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125851831
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
125851831
microRNA pathway
RISC loading complex
125851831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
DUF3577
Motif
Other DBs
NCBI-GeneID:
125851831
NCBI-ProteinID:
XP_049387521
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MPIRQMKESSEQHIVIKPHLQNTMNPVQKTPKTPQNGKGPPNQEPQNNKIHNQTSPPSRN
RGRRRGRGGRKSDQGETFMRPSSRPCTAASKPVIAASVEATNVSGVENNGSNSGFPSSSK
SLCFAPRPGYGQLGTKCIVKANHFLADLPDKELNQYDVTVIPEVSSRTVNRAIMAELVKL
YKESHLGMKLPAYDGRKSLYTAGELPFKWKEFTIKLIDEDDVINGPKREREYKVVIKFVA
RANLHHLSEFLAGKRADGPKEALQILDIVLRELSIKRYCPVGRSFFSPDIRKPQPLGDGL
EAWCGFYQSIRPTQMGLSLNIDMASAAFIEALPVIEFVAQLLGKDVSSRPLSDSDRVKIK
KALRGVKVEVTHRGNVRRKYRVSGLTTQPTRELVFPVDDNLTMKSVVEYFQEMYGFTIKN
THLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLSEKQITSLLKVTCQRPRDRENSILQT
VQHNDYNEDPYAKEFGIKISEKQASVEARVLPAPWLKYHETGKEKDCLPQVGQWNMMNKK
MINGMTVNRWACINFSRSVQESVARGFCNELAQMCQVSGMEFNPEPIIPIYMARPDQVEK
ALKHVYHSCVNKLKGKELELLLVILPDNNGSLYGDIKRICETDLGLITQCCLTKHVFKIS
KQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAA
VVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPARGTVSGGMIRDLLISFRKATGQ
KPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANN
HKDRSSIDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD
GIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMPENNSGSPHQGSSKAI
RETGVRPLPALKENVKRVMFYC
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgcctataaggcagatgaaagaaagttcagaacaacacattgtgatcaaaccccatttg
caaaacaccatgaatccagttcagaaaacccccaagactcctcaaaatggcaaagggcca
ccaaatcaagaaccccaaaacaacaaaatccataaccagacttcacccccttcaagaaat
agaggtagaagaaggggaagaggaggcagaaagtcagatcaaggtgagacctttatgagg
cctagttcaaggccttgtacagcagcaagcaagccagttatagcagcttctgttgaagca
acaaatgtgtcaggagttgagaataatggaagtaactcagggtttccttcttcaagcaag
tctttgtgttttgccccaagaccaggttatgggcaacttgggacaaaatgcattgtaaaa
gcaaaccattttttggctgatttaccagacaaagagttgaaccagtatgatgttactgta
atccctgaagtgtcatcaagaactgtaaacagagctatcatggcagagctggtgaaactg
tacaaagaatcccacctagggatgaaattaccagcttatgatggcaggaagagtctttac
actgctggtgaacttccttttaagtggaaggagtttaccattaagcttattgatgaagat
gatgtgatcaatggtccaaagagagaaagagaatataaagtggttattaagtttgttgca
agagcgaatctacatcatctgagtgaatttctagctggtaagcgcgctgatggtccaaaa
gaagctcttcaaattctggacattgttttgagagagctttcgatcaagaggtattgtcct
gttggaagatctttcttttcgcctgatatccgcaaacctcagcctcttggtgatggttta
gaagcatggtgtggattctaccagagcattagaccgacccaaatgggcttgtcgcttaac
attgatatggcttcagctgcatttattgaagctctacctgtgatagagtttgtagcccag
cttcttggaaaagatgtgtcgtcaagacccttatctgactcggatcgtgtaaagattaag
aaggctcttagaggagtgaaagttgaagtgacacacaggggcaatgtccggagaaagtat
agagtttcaggactaacaactcagcccacgagagaactagtatttcctgttgatgacaat
ttaaccatgaagtcggtagtagaatactttcaagaaatgtatggctttacaataaagaat
acacatcttccatgccttcaagtagggaaccaaaagaaagccaactatttacctatggag
gcgtgtaaaattgttgagggacaacgatacaccaaaaggttgagtgagaagcaaattact
tctcttttgaaggtcacatgccaaagaccaagagatcgtgagaactcgattttgcagact
gttcaacacaatgattataatgaagacccatatgcaaaggagtttggaatcaaaatcagt
gaaaaacaagcatcggtggaagcccgcgtgctgcctgctccttggctaaaatatcatgag
acagggaaggagaaggattgtttacctcaagttgggcagtggaatatgatgaacaagaaa
atgataaatgggatgaccgtcaaccgttgggcatgcatcaacttttcacgaagtgtccaa
gagagtgttgctcgtggcttttgtaacgaactggctcagatgtgtcaagtatctggaatg
gagttcaatccggaaccaataattccaatatacatggccaggccagatcaagtagagaaa
gccttgaagcatgtatatcattcatgcgtaaacaagctaaaaggaaaagaacttgagctt
ctattggtcattctaccagataacaatgggtccctctatggtgacataaagcggatatgt
gagactgatcttggtttaataacccaatgctgtctgacaaagcatgtattcaagatcagc
aaacaatatttggcaaatgtatccttgaagatcaatgtcaagatgggtggtcgaaacact
gtcctgttggatgctattagctgtagaataccattggtaagtgatatacctaccatcata
tttggagcagatgtgacccaccctgaaaatggagaagactctagcccttcaattgcagct
gtagtagcttctcaagattggcctgaggtgacgaaatacgctggtcttgtttgcgctcaa
gctcatagacaagaacttatacaagatttgtacaagacatggcatgatcctgcacgtgga
acagttagtggtggcatgataagggatctccttatatccttcagaaaggccacaggccaa
aagccacaaaggataatcttttatcgggatggagtgagtgaagggcaattttaccaagta
ctgcttttcgagttggatgcaattaggaaggcttgtgcatctctagagccaaattaccaa
ccgccagtaacttttattgtggtacagaaacggcatcacacccgactatttgctaataat
cacaaggacaggagcagcattgataggagtggaaacatattgcctggtactgtggttgat
acaaaaatctgtcatccaacagaattcgacttctatctttgtagccacgctggcattcag
ggtacaagccgtcctgcacattaccatgttctgtgggatgaaaacaatttcacagcagac
ggaatccagtccttgactaacaatctctgctatacatatgcaaggtgcacgcgttctgtc
tctgtggttcctccagcatattatgcacatttagctgcatttcgagccagattctacatg
gaaccagacatgccggaaaataattcaggcagccctcatcaaggcagcagcaaggctata
cgagagacgggtgttagaccgttgcccgcgcttaaagaaaatgtgaagagagtaatgttt
tattgttag
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