Solanum stenotomum: 125854314
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Entry
125854314 CDS
T08385
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 17
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sstn01002
]
125854314
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125854314
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125854314
Peptidases and inhibitors [BR:
sstn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125854314
Ubiquitin system [BR:
sstn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125854314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
125854314
NCBI-ProteinID:
XP_049389778
LinkDB
All DBs
Position
2:complement(6902548..6911333)
Genome browser
AA seq
1165 aa
AA seq
DB search
MLVGGDLGFLSSLVVAAFVAVFGPVLGFVVRRKWRRSVARREEIKRLLVLASEEAARVEL
QAAEEYGYGYGYRYESLKEEDEVFVETPASSAPPPTISTSYSGSRQLQYQCAVCSSPTST
RCSQCKAVRYCSGKCQILHWRQGHKDECRPVSNLDHLNDVEAKSHLKTYKQESDGSHLKS
TEVEGRRSSESGDASPEEAALLRSKYFATSDGKHDTVGQSLTDSKCLNLNSSFVLHSSSC
EHLDLSTSSGSSVDHSASDSNDSDASDSHRSAVIDTVKIQTNHSKVERFKPSYTEQPQLV
QTADYDSTSGKYTHTKPSIHGDAQSKYWTSSTSSGTDDSSESSLTAPSTPSSGFWEGPVP
YTRSRIGSLDSIADPPSKNACDIKISDSQSTSCRPPEIARPLIPEAGEQGSNSKKNLENP
TPIMVEVLKPVNRAESRFEIKDQKESSRSSASRSVTSDQLDVHGSRDKCTLTSEEGRYSS
SSGSANLKKHDGLKVSLRSSSPSKSYRGVEDSTSALQLPKDRQKGSFPAKISDNISSNNR
HDIQYVKSAKINGTQVASACSAESSAPLPNAKNGLKSSVLKVVDQLRSSKLTRGEESDVN
GRYGNKALFPYESFVKLHNWKNELRPFGLVNCGNSCYANAVLQCLAFTPPLTSYFLQGLH
SKTCEKKGWCFTCEFESLVLKAKDGNSPLSPSSIISHLESIGSNLGNGREEDAHEFLRYV
IDTMQSICLKEAGVTAPGSFEEETSLIGLTFGGYLRSKIECMRCGGKSERQERIMDLTVE
IDGDIGTLEEALKQFTHTETLDGENKYRCGRCKSYEKAKKKLKVVEAPNVLTVALKRFQS
GKFGKLNKTIKFPEFLNLAPYMSGTSDKSPVYQLYGVVVHLDVMNAAFSGHYVCYVRNFQ
NKWYKVDDSSVKSVELERVLSKGAYMLLYSRCSPRGPRIMRSLTIPRDPKRSKQLTCKSR
SHTRSPWDSSHGDSTSKTCNECSYPSHTSVRPIRPIFEEDTSSEQSSFFSELGSCSTDST
NRDSTSTDDLNIDIFGDSGVCWNSLWRSSSDSDTSSSSSSPSPLYSRHSPLADLDRYASA
HEETSCSGNPETAGDGQGFWTGLHDRKGYTGIPETSGRTPPLCPNPTKHCRKVVSSHSSS
KTDSSRLGRVNPCDKSKSPVTCRDR
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtgggaggggatctagggtttctctcgagcttggtggtggcggcgtttgtggcg
gtttttggaccggtgttaggttttgtggttagacggaaatggaggcgttcggtggcgagg
agggaggagatcaagaggttgttggttttggcttcggaggaggcagctagggttgagcta
caagccgctgaggaatatgggtatggttatgggtataggtatgagtcgctgaaggaggag
gatgaggtgtttgttgaaacaccggcatcatcagcaccaccaccaacaatttcaacatca
tattctggttcacggcaattgcagtaccaatgtgcggtttgctcatctccaacctctact
cggtgctcccaatgtaaagcagttcgctactgctctggcaaatgtcaaatccttcattgg
agacaaggtcacaaggatgaatgccgtccagttagcaacttggatcacctcaatgatgtt
gaggcaaaatctcatctgaagacgtataagcaggaatcggatggaagtcatcttaagagc
actgaggttgaaggcagacgttcttcagaatcaggcgatgcttccccagaggaagctgca
cttttgagatccaaatactttgcaacatctgatggaaaacatgacacagttggacagagt
ctgacagattcaaaatgtctcaatttgaactccagttttgtgcttcattcatcttcatgt
gaacatttggacctctctacttcaagtggatcttctgttgatcattctgcatctgattca
aatgactctgatgcttctgacagtcataggtctgctgttattgatacagttaagattcag
actaatcattccaaggtagaaagatttaagccatcctacacagagcaaccccaattggta
caaactgcagattatgattccacgtctggaaaatatactcacaccaagcctagcattcat
ggggacgcgcagtctaaatattggacttcatcaacaagttcaggtactgatgactccagt
gaatcttcattgacagcgccgtctacaccctcatctggtttttgggaaggaccagttcct
tatactagatctaggattggttcacttgatagtattgctgatcctccttccaaaaatgct
tgtgacatcaagatttcagactctcaatcaacttcatgtcggccccctgaaattgctaga
cctcttatacctgaggcaggtgaacaaggatcgaactcaaaaaagaatctggaaaatcca
actccaattatggtggaagtgctgaaaccagtcaatcgagctgaatcaagatttgaaatt
aaagaccagaaagaaagtagcaggtcatcagcttcgcggtctgtaacttcggatcagctt
gatgtgcatggctcccgtgataaatgcacattgacctctgaggaaggtagatactcctca
tctagtggttctgctaatttaaagaagcacgatgggttgaaagttagtttgcgatcctca
agccccagcaagtcatatcgtggcgttgaagactctaccagtgctctacaattgccaaaa
gatagacaaaaaggatcttttcctgccaaaatttctgataatatctcttctaacaatagg
catgatatccaatatgtgaagtcagcaaagatcaatggcactcaagtggccagtgcctgt
tcggcagagtctagtgctccattaccaaatgcaaagaatggcttgaagtcatctgtttta
aaagttgttgatcagctcaggagttcaaagctgacccgaggggaagagagtgatgtcaat
ggaagatatggcaacaaggctctatttccatatgaaagttttgtgaagcttcataactgg
aagaatgaattgcggccatttggccttgtaaattgtggtaacagctgctacgctaatgct
gtccttcagtgcctggcatttacaccaccacttacttcatattttcttcaagggctccac
tctaagacatgtgaaaagaaagggtggtgcttcacatgcgaattcgaaagtttagttcta
aaagcaaaagatgggaactctcccctatctccgagtagtataatttcccatctcgaaagc
atcgggagcaatcttggtaatggtagagaagaagacgctcatgaatttcttaggtatgta
atcgacacaatgcaatccatttgcttgaaggaagctggggttactgcacctggctctttt
gaagaagaaacgagtctcattgggcttacatttgggggctatcttcgttcaaagattgag
tgcatgagatgtgggggcaaatctgagaggcaagagagaataatggatcttactgttgaa
atagacggagatataggcaccttggaagaagctttgaaacaatttactcatactgagact
ctagatggtgaaaacaagtaccgatgtggcagatgtaaatcatatgagaaggctaagaaa
aagttgaaagtggtggaggctcctaatgtcctcactgttgcattgaagagatttcagtca
ggtaaatttgggaagctaaacaagacaatcaaattcccagagtttttgaacctggcacca
tatatgagtgggacaagtgataagtcaccagtttatcagctgtatggagttgtggttcac
ttggacgtaatgaatgctgcattttctggtcactatgtgtgttacgtgaggaactttcag
aataagtggtataaagttgatgatagttcggtaaaatctgtggaactagaaagagtcttg
tcgaagggagcgtacatgcttctttattcaaggtgctcgccacgggggccgaggataatg
aggagtttgacaattcctcgtgatccaaagagatcaaagcaactgacttgtaaatcaaga
tcccatacaagaagtccatgggactcttctcatggcgattcaactagtaaaacttgcaat
gaatgttcttatcctagtcatacaagtgtgaggcctattaggccaatatttgaggaggac
acttcgagtgaacagtcatctttcttctctgagcttggttcttgcagtacagacagcact
aacagggattcaacgagcacagatgacttaaatattgatatatttggcgactctggggtc
tgttggaatagcctctggaggagttcatctgattctgacacatcctcatcctcatcttct
ccctcccctctgtactcaaggcattcaccccttgctgatttggaccgttatgcttctgcg
catgaagagaccagttgtagtggcaacccagaaacagctggggatggtcagggtttttgg
acagggttacatgatcgtaaaggttatactggcattccagaaaccagcggaaggacacct
cctctctgtcccaacccaactaaacattgtagaaaagtagttagtagtcatagtagtagc
aagaccgactccagtagattaggtcgggttaacccttgtgacaagtcgaaatctcctgta
acttgtagagatcgatga
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integrated database retrieval system
