Solanum stenotomum: 125859332
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Entry
125859332 CDS
T08385
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
sstn
Solanum stenotomum
Pathway
sstn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125859332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125859332
03036 Chromosome and associated proteins [BR:
sstn03036
]
125859332
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
APC/C
Target recognizing subunit
125859332
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
125859332
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Ge1_WD40
WDR54
DUF3069
Motif
Other DBs
NCBI-GeneID:
125859332
NCBI-ProteinID:
XP_049395012
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Position
3:complement(23568946..23571043)
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AA seq
460 aa
AA seq
DB search
MNENSLTRIQPDWYSPTRLHDTPLDYDFPGDRFIPNRSLMDLDQAHTLLTNRTNNKLRKP
NFNDEYRRKMEENLKLDVEGRPFRMMVFRGSPKLSRQSTRLIDEMRRSDKEIPLQINENR
RYRKFPLKATRALDAPLLSDDYYSNVMDWGKSNILAVVLGSILYIWNAQVQKAGVLMEVK
REDDCPTSVAWSDDGKIVAVGCDSSKLQLWDAETSRLVRDLQGHQSRVGCVSWNGHILTS
GSKDRAIINHDVRARSNLVSVMRAHRGEVCGVKWSSTGNALASGGNDNLVYIWDSLKTSS
RHYMHRFNEHHAAVKALAWCPYSSDVLASGGGIDDGCLKIWNTQKGTCISTNETGAQICG
LQWNRHHKEILSGHGFGTGESHCQLCLWSYPSMARIGEPLRHASSSRILHLSQSPDGLTV
VSAGADETLRFWEIFGPPQESSENVTHLDNLLSLKASAVR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaattcattaacaagaattcaaccagattggtattctccaactcgccttcac
gatactccgctcgactatgattttcctggtgatagatttatacccaatagaagcctgatg
gatcttgatcaagcacatactttactcaccaacagaacgaataacaaactccgaaaacca
aacttcaatgatgaatatagaaggaaaatggaggaaaatctaaagttggatgtagaagga
agaccattcagaatgatggtttttagaggaagtcctaaattgagtagacaatctacgcgt
ctaattgatgaaatgaggcgtagtgacaaagaaattcccctgcaaattaatgagaatagg
agatatcgaaagtttcctttgaaagcaactcgagctttagatgctcctcttttatcggat
gactattactcgaatgttatggattggggaaaatccaacatacttgctgttgttctgggg
tcaattctatatatatggaatgctcaagtgcaaaaagctggggtactgatggaagtgaag
cgtgaagacgattgtcctactagtgtagcatggtctgatgatgggaaaatagtagcagtt
ggttgtgattcctctaaactccagctctgggatgctgagacttccaggcttgtgagagac
ctgcaaggccatcagagcagagtgggttgtgtttcatggaatggtcatattttaacctca
gggagtaaagacagagctatcattaatcatgatgtgcgagcaagaagcaatttggtctct
gtaatgagagcacatagaggggaagtttgtggcgtgaagtggtctagcacggggaatgca
cttgccagtggtggaaatgacaatctggtgtacatatgggatagtttaaagacgagctca
aggcattatatgcaccggttcaatgaacatcatgctgcagtcaaggccctagcttggtgt
ccatatagcagtgatgtattagcctctggagggggcatagatgatggatgtcttaagatt
tggaacacacagaaggggacatgcatcagcaccaatgaaactggagctcagatttgtgga
cttcaatggaacaggcatcacaaagagatattaagtggccatgggtttggaacaggtgaa
tctcattgtcagttgtgtttatggagttatccttccatggctagaataggagagccattg
cgtcatgcttcttcatcaagaattctgcatctctcccagagccctgatggtttgactgtg
gtatcggctggagcagatgagactcttaggttctgggagatatttggccccccacaggag
agcagtgaaaatgtaacacatttggataatctcttgtccctaaaggcgtcagcagtgaga
taa
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