Solanum stenotomum: 125862217
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Entry
125862217 CDS
T08385
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sstn01002
]
125862217
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125862217
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125862217
Peptidases and inhibitors [BR:
sstn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125862217
Ubiquitin system [BR:
sstn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125862217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
zf_UBZ
HNH_5
Motif
Other DBs
NCBI-GeneID:
125862217
NCBI-ProteinID:
XP_049398200
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All DBs
Position
4:1982161..1990874
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AA seq
626 aa
AA seq
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MGMPSACAVCGNVTSKRCSRCKMVNYCSDACQRSDWNSGHKYGCRDFQPSVKGNSEQSQP
TLQRRYMFGTSFVPFSGKNNIQELFPYEEFLNYFYWGGSGYPPRRLINCGNSCFANVVLQ
CLTQTRPLVAYLLEKGHKGECRSNGWCFLCEFQLHVEQCTWCQNPLSPIDILSGLPNIGG
NLSCGNQEDAHEFMRFAIDTMQSGLLAEFDGDKAVPLSAQETTIIQHIFGGRLQSQVVCT
ECGNHSNQFENMMDLTVEIEGKAESLEECLGQFTAEECMDGEDMYKCDRCNDYVKAWKRL
TILEAPNILTIALKRFQSGDPVKLNKRVTFPESLDLNPNMSETGDGNDHFNLYAVIVHED
MSNALHCGHYICYIKDLRENWYRADDTEVIDVKIDEVLAQEAYMLLYSRHLARPTSLYPL
ESLNKQDKAEGKQHSTVAPLECHKTTVSPAICSNPVSLPTDKRSVIVREKEELPSVTNFE
GGREDQDMVDSGESRKVLQELQDVRESSADGETYLRMLSATYSFIDSCAETVIQKAEGRF
PVSDNEEKTEMWRRTFYESLFGSSSEEEDSVVTDVEFVVSNIEENTETCEGTAHDSVFES
PREDSVATIGEMPYDSSSDASDSSSP
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggggatgccgagtgcttgcgccgtctgcggcaatgtcacctctaaacgatgctcccgc
tgcaagatggttaattactgttctgatgcttgccaaagatccgattggaactcggggcac
aagtatggatgtagggattttcaaccatctgttaaaggtaattctgagcaatcacaaccg
actttgcaaaggaggtacatgtttgggacttcatttgttccttttagtggaaaaaataat
atacaggaactttttccatatgaagaattcttgaattacttttactggggtggttcaggc
tatcctcctcgtagactcataaattgtggtaacagctgttttgctaatgtggttctgcaa
tgtctaacacagactagaccacttgtcgcctacttgttggagaaaggccataaaggagaa
tgtagatcgaatggttggtgcttcctctgcgaatttcaactccatgttgaacaatgtact
tggtgtcagaatcccttgtcaccaattgacatactatcagggttgcctaacattggtggt
aatctttcttgtggaaatcaggaggatgcccatgagtttatgaggtttgctattgacaca
atgcaatcggggttacttgctgaatttgatggagataaggctgtacctcttagcgctcag
gaaacaactattattcagcatatatttggtggtcgccttcaatctcaggttgtatgtaca
gaatgtggtaatcactcgaatcagtttgagaatatgatggatctgactgtagagattgag
gggaaagctgagtctttggaggaatgcttaggtcaattcactgccgaagagtgtatggat
ggtgaagatatgtataaatgtgatagatgtaatgattatgtcaaggcatggaagcgccta
acgatcctggaggcaccaaatattctgacaatcgctttgaaaaggtttcagagcggggat
cctgtcaaactaaataagagggtgacttttcctgaaagtttagatctaaatcctaacatg
agtgaaacaggagatggcaatgaccatttcaatctgtatgcagtgattgttcatgaggat
atgtcaaatgcattacattgtggccattatatctgctacatcaaggatttgagagagaat
tggtatagagccgacgacactgaggttattgatgtaaaaattgatgaggttcttgcacag
gaagcatacatgctcttatatagcaggcatttagccaggccaacatccttatatcctctt
gaatcattaaataaacaggacaaagcggaaggcaagcagcattccacagttgcacctctt
gagtgccataagacaactgtgtctcctgctatatgttctaatcctgtttcattgccaact
gataagagatcagtgattgtcagggaaaaagaggagttgccctcagttactaactttgag
ggtggtagggaggatcaagatatggtagattctggggaaagtcgtaaagtcttgcaggaa
cttcaggatgttagagaatccagtgcagatggagaaacttatctaagaatgttatcagct
acttattccttcattgatagttgtgctgaaactgtaatacagaaagctgaagggagattc
cccgtttctgacaatgaggaaaaaaccgagatgtggagaagaactttttatgagtctctg
tttggaagttctagtgaggaggaggattctgtagttacagatgttgaatttgttgtttct
aacattgaggaaaacaccgagacatgtgaaggaactgcacatgactctgtgtttgaaagt
cctcgtgaggattctgtagccacaattggtgaaatgccgtatgattcttcttccgatgcc
tctgactcaagctcaccttaa
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