Solanum stenotomum: 125864799
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Entry
125864799 CDS
T08385
Name
(RefSeq) polyubiquitin-like
KO
K08770
ubiquitin C
Organism
sstn
Solanum stenotomum
Pathway
sstn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125864799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125864799
Ubiquitin system [BR:
sstn04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
125864799
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
TBK1_ULD
Rad60-SLD_2
Dsc3_N
Ubiquitin_5
DUF2604
Motif
Other DBs
NCBI-GeneID:
125864799
NCBI-ProteinID:
XP_049400839
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All DBs
Position
5:complement(62901638..62904661)
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AA seq
533 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatctttgttaagacccttactggcaagaccataactctcgaggttgagagttct
gacacaatcgataatgttaaggcaaagattcaagacaaggaaggaattcctcctgatcag
caaaggctgatctttgctggaaagcaattagaggatggtagaactcttgcagactataac
atccagaaggagtccaccctccaccttgtccttcgtctgcgtggtggcatgcagatcttt
gtgaaaaccttgactgggaagacaattactcttgaggttgagagctctgacactattgac
aatgtcaaggcaaaaatccaagataaggaagggattcctccagatcagcagagattgatc
tttgctgggaaacagttagaggatggaagaactctagctgactacaacatccaaaaggag
tccaccctccaccttgtccttcgtctgcgtggtggcatgcagatctttgtgaaaaccttg
accgggaagacaattactcttgaggttgagagctctgacactattgacaatgtcaaggca
aaaatccaagacaaggaaggaattcctccagatcagcagagattgatctttgccggtaaa
cagttggaggatggaagaactctagctgactacaacatacaaaaggagtccacactccac
cttgtccttcgtctgcgtggtggcatgcagatctttgtgaaaaccttgactggaaagact
attacccttgaggttgaaagctcagacactattgacaatgttaaggcaaaaattcaggac
aaggagggcattcctccagaccagcaaaggttgatttttgctggaaagcaacttgaggat
ggtcgtactcttgctgactacaatattcagaaggagtccaccctccaccttgtccttcgt
ctgcgtggtggtatgcaaatttttgtgaagacattgacagggaagactattacccttgag
gttgagagttctgacaccattgacaatgtcaaggctaaaattcaagataaggaaggcatc
ccacctgaccagcagaggttgatttttgctgggaaacagcttgaggatggaaggactcta
gcagattacaacattcaaaaggaatcaactctccatttggtgctgcgcctaaggggtggt
atgcagatttttgtgaagacattaaccggcaagacaatcaccctggaggttgaaagttca
gacaccattgataacgtgaaggcaaagatccaagacaaagaagggattccaccagaccag
cagcgtttaatttttgctggcaagcagcttgaggatggtaggactcttgctgattacaat
atacagaaagagtccacactccatttggtgctccgtttgagaggaggaatgcagatattt
gtcaagacattgactggaaagacgattaccttggaggtggagagctcagataccattgat
aatgtgaaggcgaagattcaggataaggagggtatccccccagaccagcagaggttgatt
tttgctggtaagcagctggaggatggtcgcacccttgctgactataacattcagaaagaa
tcaactcttcaccttgttcttcgtctccgtggtggcttttga
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