Solanum stenotomum: 125866348
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Entry
125866348 CDS
T08385
Name
(RefSeq) BTB/POZ domain and ankyrin repeat-containing protein COCH-like
KO
K14508
regulatory protein NPR1
Organism
sstn
Solanum stenotomum
Pathway
sstn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125866348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125866348
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
125866348
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GFIT
Motif
Pfam:
BTB
Ank_2
Ank
Ank_5
Ank_3
DUF3420
Ank_4
Motif
Other DBs
NCBI-GeneID:
125866348
NCBI-ProteinID:
XP_049402655
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Position
5:59651517..59654036
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AA seq
493 aa
AA seq
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MTPEDSLRTLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPESS
SVSGPRLGPFGAGAGLASSPRGTTTSCSQVIPVNTVGYEVFLLMLQFLYSGQVSIVPQKH
EPRPNCGERSCWHTHCTAAVDLALDTLTAARSFGVEQLALLTQKHLISMVEKASIEDVMK
VLIASRKQDMHQLWTTCSHLVAKSGLPPEILTKHLPIDVVAKIEDLRLKSSISRRSLIPH
HHHHHHQQHQMSSNIELEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDESLALHYAVEN
CSREVVKALLELGAADVNYQAGPSCKSPLHLAAEMVSPDMVAVLLDHHADPNIQTVDGIT
PLDILRTLTSDFLFKGAIPGLTHIEPNKLRLCLELVQSAAMVISREEGEANNNQSSENMY
THVREDHSSSTSSGNNNLNLDSRMVYLNLGANVATHHQMACKMNNNEGDHDCSRSHNNQN
PSTMYHHHHSHEY
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgactcctgaagattccttaagaactctctctttagattatctaaatctcctcatcaat
ggtcaagcttttagtgatgttacttttagtgttgaaggtcgtttagtacatgctcataga
tgcatcttagctgctagaagtctcttctttcgcaaattcttctgcgggccggagtcatct
tctgtctccggcccgcggttgggcccgttcggcgctggcgctggactagcgtcgtcgccg
aggggcacaacaacaagttgttcacaagtaatacctgtgaacactgtagggtatgaggta
tttttattgatgttacaatttttgtatagtggacaagtttcaattgtgccacaaaaacat
gaaccaaggcctaattgtggtgaaagaagctgttggcatacacattgcactgcagccgtt
gatcttgcacttgatacacttacagccgctagatcttttggagttgaacaacttgctttg
cttactcagaagcatttgataagcatggtggagaaagcttcaattgaggatgtgatgaaa
gttttaatagcttcaagaaaacaagacatgcatcaactttggactacttgttctcatttg
gttgcaaaatcaggcctcccacctgaaatcctaaccaaacacctccctattgatgttgtt
gctaaaatcgaagatctccgtctcaaatcctctatatcgcgaagatctttaatccctcat
catcatcaccatcatcaccagcaacatcaaatgtcctcgaacattgagctcgaggaccaa
aagatccgacgaatgagacgagcgctcgattcgtcggacgttgaactagtcaaacttatg
gtaatgggagaagggttaaatcttgacgagtcactcgccttacattacgcggttgaaaat
tgtagccgcgaagttgtaaaggctttactagagctcggcgcggccgatgttaattatcag
gccgggccgagctgtaaaagcccgttacacttagcggccgaaatggtctcaccagatatg
gttgcggttcttctagatcatcatgctgacccgaatatccaaacggtggatgggatcact
ccacttgatattctacgaaccctaacgtccgattttttattcaaaggtgcgatcccgggt
ctaactcatatcgaaccaaataaactacgtctatgtcttgagttagttcaatccgcggct
atggtaatttcgcgagaggagggtgaagcgaataataatcaatcttcggagaacatgtat
acacatgttcgcgaagatcatagttcgagtacgagcagtggaaacaacaacttgaatttg
gattcaagaatggtgtatttgaatcttggtgcaaatgtagcaactcatcatcaaatggca
tgcaaaatgaataataatgaaggtgatcatgattgcagcagaagccacaataatcagaat
ccatcaacaatgtaccatcatcatcattctcatgagtattag
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