Solanum stenotomum: 125866613
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Entry
125866613 CDS
T08385
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
sstn
Solanum stenotomum
Pathway
sstn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125866613
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sstn01002
]
125866613
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125866613
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125866613
Peptidases and inhibitors [BR:
sstn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125866613
Ubiquitin system [BR:
sstn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125866613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Ribosomal_L19e
Ribosomal_L37ae
Motif
Other DBs
NCBI-GeneID:
125866613
NCBI-ProteinID:
XP_049402852
LinkDB
All DBs
Position
6:complement(60704372..60709527)
Genome browser
AA seq
1010 aa
AA seq
DB search
MGKKAKKKARSGVKETRNPVASANRIDEKISPNIETHDDAVSVVNDRKGCPHVDKVIDVD
KVSTKLKSSKPVRCKDCKEGVADRQAGRTKGKQGKKKGSADPKQKSKAIWVCLVCGHFSC
GGVGLPTTPQSHAVRHARQYHHPLAVQFENPQLRWCFLCNTLLHAKKVEDGSEQKDVLED
IAKMIKRRPSEGPTTDVEAVWFGSGSVTSEIKSEASASISADGKGGCAIRGLVNLGNTCF
FNSIMQNLLAMNRLRDYFLKFDGFAGPLTADLKKLFTDTSNEASLKESVNPKALFGSLCT
KAPQFRGYQQQDSHELLRCLLDRLCTEELTRRKQIKSSQDGGKSLSSCPTFVDEIFGGRL
SSTVSCLECGHTSVVYEPFLDLSLPVPTKKPPSKEAQSVSHAKISKPPKRSGKVLPKVSR
DAASLNSQGNGENSLSHVHPRVPATEGMILPSDTSLESIDAGVMADNTGLTSQDSCFTQK
SRNEETCEGVTRQLATVDDSTWLDFLEQDTLPNGDDAASEVDHILTNQGSETGSVQPVDP
LQNNLDADTEMKLTCTDSTRSPNDLMCLDDQGQSKSPDRNIASDFSKKLLIKESGKISSV
DSNLGTDSCTRLSEDEAPLQLQESEILLLPYKEVTSTAGDMLKEGCEVSSAAVGWEEDSL
DLDGVGDLFNEPESDAQSLCNAAVSQANGLRETSFTVSNISVSDPEELDNTDAPVSVKSC
LAYFTKPELLSKSEHAWQCENCTKVLKEKRMRSKNKLTKPRSHSMVNGHEDKNPNGVSSS
GTSPPPELRTHNGSTDKDALETFEDRLLTPKGTSPRGDRDSVSSLLENSTRENHSATSSQ
VNRDYQTNKVQLLEAPLISAISESEESENEETDFKRVRVERDATKRILIDKVPPILSIHL
KRFRQDARGRLSKLSCHVNFRDAVDLKPYVDTRCLQKDTYKYQLIGVVVHSGTMRGGHYV
AYVRGGPKITGKDENAEDFVWYYASDTHVREVSLKDVLRSEAYILFYEET
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaaggctaagaaaaaggctagaagtggtgtcaaggagacacggaatcctgtt
gcatctgcaaatcgtattgatgaaaagatcagtccgaatattgaaactcatgatgatgca
gtttctgttgtaaatgatagaaaaggatgtccacatgttgataaggttattgatgtggac
aaagtctccactaaacttaagtcttcgaaacctgttaggtgcaaagattgcaaggaagga
gtagctgatagacaagctggtaggacgaaaggtaaacaaggaaaaaagaagggaagtgca
gatcccaagcagaagtctaaagccatttgggtctgtttagtatgcggtcatttctcgtgc
ggaggtgttgggttgcctactacacctcagagccatgcagttcggcatgcgagacaatac
catcaccctcttgctgtacagtttgaaaatcctcaactgcgctggtgttttctgtgcaac
acactacttcatgctaaaaaagtagaggatggcagtgaacaaaaagatgtacttgaggac
attgcaaagatgattaaaaggcgtccgtctgaagggcctactactgatgtggaagctgtt
tggttcgggagtgggagtgtcactagcgaaattaaatcagaagcttctgcttctataagt
gctgatggaaaaggtggttgtgccattaggggattggttaatttagggaacacatgtttt
ttcaattcaataatgcagaacctactggcaatgaatagactacgggattactttcttaag
tttgatggttttgctggtcctcttaccgctgatctgaagaagctctttactgatacaagc
aatgaggcttcgttgaaagaatctgttaatccaaaagctttgtttggttcattatgtacc
aaagctccacagtttcgaggataccaacagcaggacagtcacgaattgcttcgttgttta
cttgatcgtctgtgtactgaggaattgacccgcagaaagcaaatcaaatcttctcaggat
ggcggtaaatccctgagttcatgtccaacatttgtcgatgaaatctttggtggtagactc
tctagcactgttagctgtcttgaatgtgggcacacttcagtagtctatgagccattcttg
gatctctcattgcctgttccgactaaaaaacctccttctaaagaagctcaatcagtctcc
catgccaaaatatcaaaacctccaaagagaagtggaaaagttcttcctaaagttagcaga
gatgcagcttctctcaattctcaaggaaatggagagaactctctcagccatgtgcatccc
agagtacctgccactgaaggaatgatacttccttctgatacatcgctagaatccattgat
gctggtgttatggctgataatacgggtttaacttcacaggactcatgtttcactcagaag
tcccgtaatgaggaaacttgcgagggtgtgactaggcagttggctacggtggatgactcg
acatggttagattttctcgaacaggatacactgccaaatggtgatgacgcagcttcagaa
gttgatcacatcctgactaatcagggttctgaaactggatctgttcaacctgttgaccct
ttgcaaaataatctggatgctgatacagagatgaagttgacatgtacagacagcactcgt
tctcctaatgatttaatgtgtttggatgaccaaggacaatccaaatcaccagaccgcaat
atagcttctgacttcagtaaaaagttacttattaaagaatctggaaagatcagctctgtg
gattcaaatcttggtacagattcatgtacgaggctatcggaagatgaagccccattacaa
ctacaagagtcagagattctgttacttccatacaaagaagtaacctcaactgctggtgac
atgttaaaagaaggttgtgaggtatcctcagctgctgttggttgggaagaagattcattg
gacttggatggtgttggagacttatttaatgaacctgagtctgatgcacagtctttgtgc
aatgctgctgtttctcaggccaatggactgagagaaactagttttactgtttcaaacatc
agtgtgtctgatccagaagagcttgataatacagatgctcctgtatcagtgaagagttgt
ttggcttattttacgaagcccgagcttctttccaaaagtgaacatgcttggcaatgtgaa
aattgcacaaaagttctaaaagaaaagagaatgagatctaagaataaattgacgaagcct
agatcacatagcatggtgaatggacatgaggacaaaaatccaaatggtgtgtcttcttca
ggaacatctcctccgcctgaactgagaactcataatggaagtacagacaaagatgcgtta
gaaacttttgaggacagattattgaccccaaagggaaccagccctcgaggtgatcgagat
tcagtgtcttcgctattggaaaacagcacacgggaaaatcacagtgcaactagcagtcaa
gtgaatagagactatcagaccaataaagttcaactgctggaagctccgctgatttctgct
atatctgaatctgaagaaagtgagaatgaggagacagactttaaaagagttagagttgaa
agagatgcaactaaacggatcctaattgataaggtccctcctattttgtcaattcatcta
aagaggttccgtcaagatgctcgggggcgcttgagtaagctgagttgccatgtcaatttt
agagatgcagttgatctgaaaccatatgttgacaccaggtgtctgcagaaggatacatac
aaataccagcttattggtgtagtagtacattcggggacgatgaggggaggtcattatgtt
gcatatgttagaggaggtcccaagatcacagggaaagacgagaacgcggaagattttgtg
tggtattatgctagtgacactcatgttcgtgaggtttcattaaaggatgttcttcgctct
gaggcatacattttattctatgaagaaacttga
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