Solanum stenotomum: 125870741
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Entry
125870741 CDS
T08385
Name
(RefSeq) probable E3 ubiquitin-protein ligase LOG2
KO
K27504
E3 ubiquitin-protein ligase LOG2 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125870741
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125870741
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125870741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-P11
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
125870741
NCBI-ProteinID:
XP_049407200
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All DBs
Position
7:complement(51893792..51899485)
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AA seq
363 aa
AA seq
DB search
MGNMGSSGVNGRRRSSSRRSHPPPPPQPQPPQPEINANRYVFAAATPYPTTQYPNPNAPP
YYQYPGYYPPPPPAMPVPLPASYDHHHRMDPGHANWVNGRYPCGPMMPPPAPYVEHQKAV
TIRNDVNLKKETLRIEPDEANPGKYLVAFTFDATVPGSMTVIFFAKEGEDCCLTPMKESL
LPPVTFEFQKGLAQKFRQPPGTGIDFSMFEEAELSKDSEADVYPLAVKAEATLDNPSESE
DGSAASGSTNSQITQAVFGKDKGEYHVRVVKQILWVNGMRYELQEIFGIGNSVESDFDGN
DPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVSEGA
AEE
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatatgggaagtagtggtgtgaacggccggcgacggagtagtagccggaggagc
cacccaccgccgcctccacaaccacaaccgccacagccggagataaacgcgaacaggtat
gtgtttgcggcggcgacgccttatcctactactcaatacccaaaccctaatgctccgccg
tattatcaatacccgggttactatccgcctccgccgccggcgatgccggtgccgttacca
gcttcgtatgatcaccaccataggatggacccgggtcatgctaattgggttaacgggcgg
tacccttgtggacctatgatgcctccaccagctccatatgtggagcatcaaaaagctgta
acaataaggaatgatgttaacttgaagaaggagactctaaggattgagcctgatgaagct
aatcctggcaagtatcttgtggccttcacttttgatgccacagttcctgggagcatgact
gtcattttctttgcaaaagaaggtgaagattgctgtttgactcccatgaaggaaagcttg
cttccaccagtaacttttgagtttcaaaaaggtttagctcagaaatttaggcaaccccct
ggaactggcattgatttttcaatgtttgaagaggcagaattgtctaaagatagtgaggca
gatgtctacccacttgcagtcaaggcggaggcaacactagataacccaagtgaatcagag
gatggaagtgcagcatcaggatccactaattcacagataactcaagcagttttcggaaag
gacaaaggtgagtaccatgttagggtggtgaagcagatcctctgggtcaatggcatgagg
tatgaattgcaagagatttttgggattggtaattcagttgaaagcgacttcgatggaaat
gatcctggaaaagaatgtgtgatatgcctctctgaacctcgggatactactgtacttcca
tgtcgtcacatgtgcatgtgtagcggatgcgcgaaggttttgaggttccagacgaatcgc
tgtcctatctgtcgacagccagttgaacgcctcttggagatcaaggtcagcgaaggcgca
gccgaagagtaa
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