Solanum stenotomum: 125870901
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Entry
125870901 CDS
T08385
Name
(RefSeq) histone deacetylase 19
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
sstn
Solanum stenotomum
Pathway
sstn03082
ATP-dependent chromatin remodeling
sstn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125870901
03083 Polycomb repressive complex
125870901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sstn03036
]
125870901
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
125870901
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
125870901
HDAC complexes
Sin3A-HDAC complex
125870901
BRAF-HDAC complex
125870901
REST complex
125870901
SHIP complex
125870901
MiDAC complex
125870901
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
125870901
Heterochromatin formation proteins
Other heterochromatin formation proteins
125870901
Chromatin remodeling factors
NuRD complex
125870901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
125870901
NCBI-ProteinID:
XP_049407407
LinkDB
All DBs
Position
7:complement(60033617..60041279)
Genome browser
AA seq
498 aa
AA seq
DB search
MDVGGNSLASGADGKKRKVSYFYDPEVGNYYYGQGHPMKPHRMRMTHALLAHYGLLQHMH
VLKPNPARDKDLCRFHADDYIAFLRSVTPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGHCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYGSGKYYSLNVPLDDGI
DDESYQSLFKPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGIELEDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRQILEDIRSKLLENLSKLQHAPSVQFQERPPDTELPEADEDLEDADSRWDADSDTNG
EERKPIPSRVRREHVEPEGKGMDDMKTEEHLREVESTFAESTSLKGGNSGSTLIDGGQIK
LEQGNSNKPFDQPTDIIS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggatgttggaggaaactccttagcatctggtgcagatggaaagaagagaaaagtaagt
tatttctatgatcctgaagttggcaattactattatggacaaggccacccaatgaagcca
catcgaatgcggatgacacatgctcttcttgcccactatggtctattacaacatatgcat
gttctgaagccaaatcctgctagagataaggatctctgcaggtttcatgctgatgattat
attgctttcttgagaagcgtaaccccagaaacacagcaagatcagctgaggcagctgaag
agattcaatgtcggggaggactgtccagtttttgatggtctttattccttctgccaaacc
tatgctggaggttctgttggtggggcagtgaagttgaaccatggacactgtgatatcgct
gtaaattgggctggtggattgcatcatgccaagaaatgtgaagcatctggtttctgctat
gtgaacgatatcgtgttggctattctggagctactcaaagttcatgagagagtgttgtat
gtggatattgatatccatcatggtgatggcgtggaagaggccttctatactacggatagg
gtcatgacagtttcctttcataaatttggagattactttcctggtacaggggatgtacgt
gatattggttatggaagtggaaaatactactctctaaatgttccactagatgatggaatt
gatgatgagagctatcagtccctctttaagccaattatgggcaaagtgatggaagttttt
aagcctggtgctgtggtcttacaatgtggtgcagattccttgtctggcgataggctaggc
tgctttaatctctctattaaaggtcatgcagaatgtgtcaagtacatgaggtctttcaat
gtgccactgttgttgcttggtggaggtggctacacaatacgtaatgttgctcgttgctgg
tgttatgaaacaggagttgcattaggaatagagcttgaagataagatgccgcaacatgaa
tattatgaatactttggtccagattataccttgcatgttgctccaagtaacatggagaac
aaaaattctcgtcagattttagaagatataagatcaaagctgcttgagaatctttcaaag
cttcagcatgccccaagtgtacagttccaggagcgaccaccggatactgaattgcccgag
gctgatgaagatctagaggatgcagattcgagatgggatgctgattcagacacgaatggc
gaagaacgtaagcccattcctagcagagtcaggagggaacatgttgaacctgaaggaaaa
ggcatggacgatatgaaaacagaggagcaccttagagaagtagaatcgacattcgcagag
tcaacaagtttgaagggtggcaattcaggttctacactgatagatggaggacagattaaa
ctggaacaaggaaactctaacaagccttttgatcaaccaactgatattatctcttga
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integrated database retrieval system
