Streptococcus suis YB51 (serotype 3): YB51_5225
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Entry
YB51_5225 CDS
T03173
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ssuy
Streptococcus suis YB51 (serotype 3)
Pathway
ssuy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssuy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
YB51_5225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssuy03400
]
YB51_5225
DNA repair and recombination proteins [BR:
ssuy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
YB51_5225
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
YB51_5225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
Kinesin
AAA_30
AAA_22
AAA_19
UB2H
AAA_7
Microtub_bd
AAA_5
AAA_16
AAA
AAA_25
IQ_SEC7_PH
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AGW87417
LinkDB
All DBs
Position
complement(1075971..1077956)
Genome browser
AA seq
661 aa
AA seq
DB search
MINRNTENQFKLVSKYSPSGDQPQAIETLVDNIEGGEKAQILMGATGTGKTYTMSQVIAR
VNKPTLVIAHNKTLAGQLYSEFKEFFPENAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSV
NDEIDKLRHSATSALLERNDVIVVASVSCIYGLGSPKEYSDSVVSLRPGQEISRDQLLNS
LVDIQFERNDIDFQRGRFRVRGDVVEIFPASRDEHAFRVEFFGDEIDRIREIESLTGKVL
GDVDHLAIFPATHFVTNDDHMETAIAKIQAELEEQLKIFEAEGKLLEAQRLKQRTDYDIE
MLREMGYTNGVENYSRHMDGRSEGEPPYTLLDFFPEDYLIMIDESHMTMGQIKGMYNGDR
SRKEMLVNYGFRLPSALDNRPLRREEFESHVHQIVYVSATPGDYEMEQTDTVVEQIIRPT
GLLDPEVEVRPTMGQMDDLLGEINARVEKGERTFITTLTKKMAEDLTDYLKEMGVKVKYM
HSDIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLI
QTIGRAARNSEGHVIMYADKVTESMRKAMEETARRRQIQMAYNEEHGIIPQTIKKEIRDL
ISVTKAVTQDKEEVVDFNALNKDERKAMIKKLEGQMQEAAEVLDFELAAQIRDMVIELKN
M
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgataaatcgaaatactgaaaaccaatttaaacttgtttctaaatactcaccgtctggt
gaccagccccaagccattgaaaccttggttgataacatcgaggggggcgaaaaagctcag
attctcatgggggcgactggtacgggtaagacctacaccatgagtcaggtcattgcccgt
gtcaataagcccactcttgtcatcgcccacaacaagactctagctggtcagctctacagc
gagttcaaggaattcttcccagaaaatgcggtcgaatacttcgtatcttactatgattac
taccagccagaagcctatgtaccgtctagcgatacctatatcgagaaggacagttcggtc
aatgatgagattgacaaacttcgtcattcagcgacttcagcacttctcgaacgaaatgat
gtcatcgttgtggcttcggtttcctgtatctacggtttgggatcgcccaaggaatattca
gatagcgtggtcagcctgcgaccaggtcaggagatttcccgtgatcagttgctcaactct
ctggtagatattcagtttgagcgcaacgacatcgacttccaacgggggcgtttccgtgta
cgtggagatgtggtggagattttcccagcttcccgtgatgaacacgcctttcgtgtggag
ttttttggtgatgaaatcgaccgcattcgtgagattgaaagcctgacagggaaggttttg
ggcgatgtggatcacttggccattttccctgccacccatttcgtgaccaacgatgatcac
atggaaacggctattgccaagattcaggcggaactggaagagcagctcaagatctttgag
gcagaaggaaaactcttagaagctcagcgattgaaacaacggaccgactacgacatcgag
atgcttcgagaaatgggctacaccaacggagttgagaactattcacgacatatggacggg
cgaagcgagggcgagcctccctacaccctgctggactttttccctgaagattacctgatt
atgattgacgagagtcatatgaccatggggcagattaagggaatgtacaatggtgaccgc
tcacgcaaggagatgttggtcaactatggtttccgcctcccgagtgcactggacaaccgt
ccgctgcgcagggaagaatttgagagccatgtccaccagattgtctatgtatctgcgacg
ccgggtgactatgaaatggagcagaccgataccgttgtcgagcagattattcggccgaca
gggcttttggatccagaggtggaagtccgtccaaccatgggccaaatggacgacctcttg
ggcgaaatcaatgcccgtgttgagaagggtgagcggacctttatcactaccctgaccaag
aaaatggcagaggacttgaccgactacctgaaagaaatgggcgtcaaggtcaagtatatg
cactcggacatcaagaccttggagcgtacggagattatccgtgatcttcgcttgggtgtc
tttgatgttttgatagggattaacctgcttcgtgaagggattgacgtgccagaagttagt
ctagtcgctatcttagacgcagacaaggagggcttcctccgtaatgaacgggggctcatc
cagacaatcggtcgagcggctcgtaactctgaaggtcatgtgattatgtatgcggacaag
gtcaccgagtccatgcggaaggccatggaagaaacagcccgccgccgtcaaatccagatg
gcttataatgaagaacatggcatcattccacaaactattaagaaagaaatccgtgacctg
ataagcgtgactaaggctgtcactcaggacaaggaagaagtagtggacttcaatgctctt
aataaagatgaacgcaaggctatgatcaagaaactggaaggtcagatgcaggaagcagca
gaagtgcttgactttgaactggcagctcaaattagggatatggtcattgagttgaagaat
atgtag
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integrated database retrieval system
