KEGG   Streptomyces sp. SirexAA-E: SACTE_4536Help
Entry
SACTE_4536        CDS       T01601                                 

Definition
(GenBank) DNA polymerase LigD, polymerase domain protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
ssx  Streptomyces sp. SirexAA-E
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ssx00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    SACTE_4536
Enzymes [BR:ssx01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SACTE_4536
DNA repair and recombination proteins [BR:ssx03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     SACTE_4536
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(5013021..5013914)
Genome map
AA seq 297 aa AA seqDB search
MTPITEVEGRRLALSNLDKVLYPATGTTKGEVLHYYAATAADAMLPHLRDRPLSFLRYPD
GPDGLRFFTKNPPPGTPDWVRTAPVPRTDDPDARQVLVQDLPSLMWAANLVVEFHTHQWR
RGTPAVADRMVFDLDPGAPASVVECCAVALWLRERLAADGLTAYGKTSGSKGLHLIVPLE
PAPAEDVTAYAKSLAVEAQKALPDLVVHRMTRALRPGKVFVDFSQNAAAKTTAAPYTLRA
KDSPTVSAPVTWEEVEACADPADLVFLAGDMAARLERYGDLLGPLTGPGPARPLPGV
NT seq 894 nt NT seq  +upstreamnt  +downstreamnt
atgacgccgatcacagaggtggaggggcggcgcctggcgctcagcaatctcgacaaggtg
ctgtatccggccaccggcaccaccaagggcgaggtgctgcactactacgcggccaccgcg
gccgacgcgatgctcccccacctgcgcgaccgcccgctgtccttcctccgctaccccgac
gggcccgacgggctgcgcttcttcaccaagaacccgccgcccggtacgcccgactgggtg
cgcaccgcgccggtgccccgcaccgatgacccggacgcccggcaggtgctcgtgcaggat
ctgccctcgctgatgtgggcggccaatctcgtggtggagttccacacccaccagtggcgc
cgcgggacgcccgcggtcgctgaccggatggtgttcgacctggaccccggagcaccggcg
agcgtcgtcgagtgctgcgccgtcgccctctggctgcgggagcggctggcggcggacggg
ctgaccgcgtacgggaagacctcgggctccaaggggctgcatctgatcgtgccgctggaa
cccgcccccgccgaggacgtcacggcctacgccaagtcgctggccgtcgaggcgcagaag
gcactgccggatctggtggtgcaccggatgacccgggcgctgcgcccggggaaggtcttc
gtcgatttcagccagaacgccgcggcgaagacgaccgccgcgccctacaccctgcgggcg
aaggacagccccacggtgtccgcacccgtcacctgggaggaggtcgaggcctgcgccgac
cccgccgacctggtcttcctcgccggggacatggccgcacggctggagcggtacggggat
ctgctcggcccgctcaccggccccggcccggcccgccccctgccgggcgtctga

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