Sphingobium sp. SYK-6: SLG_06510
Help
Entry
SLG_06510 CDS
T01622
Name
(GenBank) biotin carboxylase
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00061
Fatty acid biosynthesis
ssy00620
Pyruvate metabolism
ssy00640
Propanoate metabolism
ssy01100
Metabolic pathways
ssy01110
Biosynthesis of secondary metabolites
ssy01120
Microbial metabolism in diverse environments
ssy01200
Carbon metabolism
ssy01212
Fatty acid metabolism
Module
ssy_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
SLG_06510
00640 Propanoate metabolism
SLG_06510
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SLG_06510
Enzymes [BR:
ssy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
SLG_06510
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
SLG_06510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_C
Biotin_carb_N
Dala_Dala_lig_C
ATP-grasp
LAL_C2
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
BAK65326
NITE:
SLG_06510
UniProt:
G2IM71
LinkDB
All DBs
Position
complement(675808..677172)
Genome browser
AA seq
454 aa
AA seq
DB search
MTIRRILIANRGEIAVRIIRTAHSLGLETVLAVSEADRDSLGARMATRALCIGPARPGES
YLRVETIVQAALGSGCDAIHPGYGFLSERAALASLCEAEGVIFIGPTAAQIEAVGDKLRA
RAEAIAADVPVVPGGPVDSLAEAQALAAGIGAPLLIKAVGGGGGRGMKLVEDLDDLAATM
DMASAEAGAAFGDARVYLERYVSQGRHVEVQVLGDGAGKVIHLGERDCSVQRRYQKLVEE
TPAPRVPDAARAAMHEAAMRFAARLDYRGAGTVEFLYDMAREQFYFLEMNARIQVEHPVS
EMVTGVDLIAEQIAIADGQGLRLAQGDVAIDGAAIECRINAEDPARDFMPSPGTVSRAHW
PAGEGIRVDTHIVDGAKIPPFYDSMIAKVIAHGPDRATALARLQAALRETRIEGVSTNLR
FQAEILADPDFAAGGVDTGFLARRAARQAERTET
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgccggatcctcatcgccaatcgcggcgagatcgcggtgcgcatcatccgc
actgcccactcgctggggctggagacggttctcgccgtctccgaggccgatcgcgattcg
ctcggcgcgcggatggcgacgcgcgcgctgtgcattggcccggcgcggcccggcgagagc
tatctgcgcgtcgagaccatcgtgcaggccgcgctcggatcgggctgcgacgcgatccat
cccggctatggcttcctctccgagcgggcagcgctcgccagcctgtgcgaagcggaaggg
gtgatcttcatcggccccaccgccgcgcagatcgaggcggtgggcgacaagctgcgcgcc
cgcgccgaagcgatcgccgccgatgtgccggtggtgcccggcggcccggtggacagcctc
gccgaagcgcaggcgctggcggccgggatcggcgcgccgctgctcatcaaggcagtgggc
ggcggcggcgggcgcggcatgaagctggtcgaggatctggacgatctcgccgcgaccatg
gacatggcatcggccgaggccggcgccgccttcggcgatgcacgcgtctatctcgaacgt
tatgtctcccagggccgccatgtcgaggtgcaggtactgggcgacggcgcgggcaaggtg
atccatctgggcgagcgcgactgctcggtgcagcggcgctatcagaagctggtggaggaa
acgcccgcgccccgcgtgccggacgcggcgcgcgcggccatgcacgaggcggcgatgcgc
ttcgccgcgcggcttgactatcgcggcgccggcaccgtcgagttcctctacgacatggcg
cgcgagcaattctacttcctcgagatgaatgcccgcatccaggtcgagcatccggtcagc
gagatggtgacgggcgtggacctgatcgccgagcagatcgccattgccgacgggcagggc
ctgcgcctcgcgcagggcgacgtcgccatcgacggcgccgccatcgaatgccgcatcaat
gccgaggacccggcccgcgacttcatgcccagccccggcacggtcagccgggcgcactgg
cccgccggcgagggcatccgcgtcgacacccatatcgtggacggcgcgaagatcccgcca
ttctacgattcgatgatcgccaaggtcatcgcccacgggccggaccgcgccaccgcgctg
gcgcggctgcaggcggcgctgcgtgaaacccgcatcgaaggcgtctcgacgaaccttcgc
tttcaggcagagatactggccgaccccgatttcgcggcgggcggcgtcgataccggcttc
ctcgcccgccgcgccgcccggcaggcggagcgcacagagacctga
DBGET
integrated database retrieval system