Sphingobium sp. SYK-6: SLG_22450
Help
Entry
SLG_22450 CDS
T01622
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssy03032
]
SLG_22450 (topA)
03400 DNA repair and recombination proteins [BR:
ssy03400
]
SLG_22450 (topA)
Enzymes [BR:
ssy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SLG_22450 (topA)
DNA replication proteins [BR:
ssy03032
]
Prokaryotic type
DNA Topoisomerases
SLG_22450 (topA)
DNA repair and recombination proteins [BR:
ssy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SLG_22450 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
zf-C4_Topoisom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BAK66920
NITE:
SLG_22450
UniProt:
G2IHZ7
LinkDB
All DBs
Position
complement(2424711..2427314)
Genome browser
AA seq
867 aa
AA seq
DB search
MKLVIVESPAKAKTIEKYLGGDYRVLASYGHVRDLPPKDGSVDPEHGFAMAWENYGDKAR
QLKAITDEAKKADELILATDPDREGEAISWHVQEVLRAKKALPERVERVTFNAITKATIT
EAMKHPRALDDDLIDAYRARRALDYLVGFTLSPVLWRKLPGAKSAGRVQSVALRLIVERE
REIEAFVSQEYWSVTALLEQGGQRFDARLVRWRGEKLDRLSIGKEGDALAAKADVEAGRF
TVSSVETKPATRNPPPPFTTSTLQQEAARKLGLSASETMRVAQQLYEDGAITYMRTDGVQ
MDESAISAARNAIAKRYDGGYLPDKPRHYQTKAKNAQEAHEAIRPTDFSRESAGSGVHAK
LYDLIFKRALASQMASARLERTAVELTDGTGQHVLRATGQVVLFPGFLALYEEGRDDPVG
RQGAGDGEDEESRLLPALKAGDQPAKKDVRADQHFTQPPPRYSEASLVKRLEELGIGRPS
TYASTIQTLKDRDYVRIEKNRFFAEESGRLVTAFLERFFERYVSYDFTAGLEEELDEISG
GRAQWQQVLEAFWRDFKPKTAEIMEQKPSEITAALDEYLAPMLFPDKGDGSDPRLCPLCH
DGRLSLRGGRYGAFIACSNYPECRYTRKFGQPGGADGDAAGGNEELGTHPETGEPILRKS
GRFGPYVEMGSGKEAKRASIPKDLPNGELTLDWATRLLSLPRTIGDHPETGKPITASLGR
YGPYLAHDGKYARLASTAEIFETGMNAAVAKLADAANRGGARKAAEPLKILGAHPRTEAE
IRLMEGRYGPYVTDGTTNATLPKTVAPDALTLEEAAQLIDERAAKAPAGKRKGKAKSSAG
KSGAAKKTTVKGKAPSKAKSKAPAAAE
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcatcgtcgaatcgccggccaaggccaagaccatcgagaagtatctcggc
ggggattatcgcgtcctggcttcatatggccatgtgcgcgacctgccgcccaaggacggg
tcagtcgatccggagcatggctttgccatggcttgggaaaattatggcgacaaggcgcga
cagctcaaggccatcacggacgaggcgaagaaggccgacgaactcatcctggcgactgac
cctgaccgcgagggcgaggcgataagctggcacgtgcaggaagtcctgcgcgccaagaag
gccctgcccgagcgggtggagcgcgtgaccttcaacgcgatcaccaaggcgacgataacg
gaggcgatgaagcatccgcgcgcgctcgacgacgacctgatcgacgcctatcgcgcgcgg
cgtgcgctggactatctcgtgggtttcacgctttcgccggtgctctggcgcaagctgccg
ggcgccaagtccgccgggcgcgtgcaatccgtggcgctgcggctgatcgtggaacgcgag
cgggagatcgaggcgttcgtctcgcaggaatactggtccgtcacggcgcttctggagcag
ggcgggcagcgattcgatgcgcggctcgtgcgttggcgcggcgagaagctcgaccggctg
agcattggcaaggaaggcgacgcgcttgcagccaaggccgatgtggaggccgggcgcttc
acggtttcctctgtcgagaccaagcccgcaacgcgcaatccgccgccgcctttcaccacc
tcgacattgcagcaggaagccgcgcgcaagcttggcctctcggccagcgagacgatgcgc
gtagctcagcagctctacgaggacggcgcgatcacctatatgcggaccgatggcgtgcag
atggacgaaagcgccatttccgccgcgcgcaatgccatcgcgaagcgctatgatggtggc
tatctgccggacaagccccgccactaccagaccaaggccaagaacgcccaggaagcgcac
gaagcgatccggcccaccgacttcagtcgggaaagcgctggctcgggtgtccatgccaag
ctttacgacctcatcttcaagcgtgcgctggcaagccagatggcgtccgcgcgactggag
cgcaccgccgtcgaactgacggacggcactggccagcatgtcctgcgcgccaccggacag
gtggtgctctttccgggttttctggcactctacgaagagggccgggacgatcctgtcggc
cggcagggtgctggggatggagaggatgaggaaagcaggctgctgcccgcgctcaaggcg
ggggatcagccggccaagaaggacgtgcgcgccgaccagcatttcacgcagccgccaccg
cgctacagcgaggcgagcctcgtcaagcggctggaggaactggggatcggtcgcccctcg
acttatgcctcgaccatccagacgctcaaggaccgcgactatgtgcgcatcgagaagaac
cggttcttcgcggaggagagcggtcggctggtgacggcattcctcgagcgtttcttcgag
cgttatgtgtcctacgatttcacggcgggccttgaagaggaactggacgagatttccggt
ggccgcgcgcagtggcagcaggtgctcgaagccttctggcgggatttcaagcccaagacc
gccgagatcatggagcagaagccgagcgagatcacggccgcgctggacgaatatctggcg
cccatgctgttcccggacaaaggcgatggcagcgatccgcggctctgcccgctctgccac
gacggccggctgtcactgaggggcgggcgctatggagcgttcattgcctgctccaactat
cccgaatgccgctacacccgcaaattcggacagcccggtggcgccgatggcgatgcagcc
gggggcaatgaggagctcggcacgcatccggaaaccggcgagccgatcctgcgcaagtca
ggacgcttcggcccctatgtcgagatgggaagcggcaaggaggcaaagcgcgcgtccatt
cccaaggatctgcccaatggcgaactgacgctggactgggcgaccagactgctttcgctg
ccacgcaccattggcgatcatcccgagaccggcaagccgatcacggcgagcctcggacgc
tatggcccttatcttgcacatgacggcaaatatgcgcggctcgcctccacggccgagatc
ttcgagaccggtatgaacgccgccgtcgccaagctggccgatgcagcgaaccggggcggc
gcccgcaaggcggccgagccgctcaagatactcggcgcgcatccgcgcacggaagcggag
attcggctcatggagggacgctatggcccttatgtgaccgacggcaccaccaatgcgacg
ctgccgaagacagtcgcgcccgatgcgctgacgctggaggaagccgcacagctgatcgac
gagcgcgcggccaaggcgcctgccgggaagcgcaagggcaaggcgaagtccagcgccggc
aagtcaggcgccgcgaagaaaacgacagtgaagggaaaggcaccgtccaaagccaagagc
aaggccccggccgccgcggaatga
DBGET
integrated database retrieval system
