Sphingobium sp. SYK-6: SLG_24790
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Entry
SLG_24790 CDS
T01622
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssy03019
]
SLG_24790 (rnc)
03009 Ribosome biogenesis [BR:
ssy03009
]
SLG_24790 (rnc)
03036 Chromosome and associated proteins [BR:
ssy03036
]
SLG_24790 (rnc)
Enzymes [BR:
ssy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SLG_24790 (rnc)
Messenger RNA biogenesis [BR:
ssy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SLG_24790 (rnc)
Ribosome biogenesis [BR:
ssy03009
]
Eukaryotic type
90S particles
RNase
SLG_24790 (rnc)
Prokaryotic type
rRNA processing factors
SLG_24790 (rnc)
Chromosome and associated proteins [BR:
ssy03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SLG_24790 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
BAK67154
NITE:
SLG_24790
UniProt:
G2IIY4
LinkDB
All DBs
Position
2671978..2672649
Genome browser
AA seq
223 aa
AA seq
DB search
MSGAAPDAWLAGLIGRAPRDKALYEQALTHGSASADHYERLEFLGDRVLGLVMADWLYQR
FPQEKEGQLSRRFNHLVAGGTCARVARAIGVRAHLRLGKQARDDGAVDSDNVLGDVMEAL
IGALYLDAGMDAATGFVRRLWEGELDSQASAPKHPKSALQEWAAANNRRPPEYSLVERSG
PQHALRFTVSVTIKGAGEARGEGHSKQEAETAAATALLTKLSG
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
ttgagcggcgccgcgccagacgcatggcttgccggcctcattggccgcgcgccgcgcgac
aaggcgctgtatgagcaggcgctcacccatggcagtgccagcgccgatcattatgagcgg
ctggaattcctcggcgaccgggtgctgggcctcgtcatggcggactggctctaccagcgc
ttccctcaggaaaaggaaggccagctttcccgccgcttcaaccatctggtagccggcggc
acctgcgcccgggtggcccgggcgatcggcgtgcgcgcgcatctgcgcctcggcaagcag
gcacgcgacgatggcgcggtggacagcgacaatgtgctcggtgacgtgatggaagcgctc
atcggcgcgctttatctcgatgccggcatggacgcggcgaccggcttcgtgcggcggctg
tgggaaggcgagctggacagtcaggccagcgcgcccaagcatcccaagtccgcactccag
gaatgggcggccgcgaacaatcgccgccccccggaatacagccttgtcgagcgcagcgga
ccccagcatgcattgcgcttcacggtcagcgtcaccatcaagggcgctggcgaggcgcgc
ggagaaggccattccaagcaggaagcggaaaccgctgctgccacggcgctgctgacgaaa
ttgtcgggatga
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