Sphingobium sp. SYK-6: SLG_31150
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Entry
SLG_31150 CDS
T01622
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase [NADP+]
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00250
Alanine, aspartate and glutamate metabolism
ssy00310
Lysine degradation
ssy00350
Tyrosine metabolism
ssy00650
Butanoate metabolism
ssy00760
Nicotinate and nicotinamide metabolism
ssy01100
Metabolic pathways
ssy01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SLG_31150 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SLG_31150 (gabD)
00310 Lysine degradation
SLG_31150 (gabD)
00350 Tyrosine metabolism
SLG_31150 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SLG_31150 (gabD)
Enzymes [BR:
ssy01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
SLG_31150 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
SLG_31150 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
SLG_31150 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
BAK67790
NITE:
SLG_31150
UniProt:
G2IMK1
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Position
complement(3362821..3364272)
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AA seq
483 aa
AA seq
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MSLNRPDLLRHQAHIDGIWISGDRKLTVEDPATGAALGTVPDLGTSHAEWAVVSAQAALV
GWRAKTASERGAVLRRWADLMLAHREDLARIMTHEQGKPLAEARGEVAYAASFLTWFGEE
ARRTYGDVIPGHGTDKRLMVTREPIGVVAAITPWNFPLAMITRKAGPALAAGCTMVVKPS
ELTPFSALALALLGEEAGIPAGALNIVTGSPREIGNVLVSHPAIAKLSFTGSTAVGKMLA
ARCMETVKRVSLELGGNAPFVVFDDADLDAAVEGAIASKFRNAGQTCVCANRFIVQTGIY
DRFVAALKERVQALRVGNGLDEGIETGPLINGAAIDKVRSHVADALRQGGKLLAGGEAIE
GAGHFFQPTLISDVSATARLCVEETFGPLAGVVRFNTEAEAIALANDTRAGLAAYLYTRD
LSRSYRVSEALQYGMVGLNTGLISTEVAPFGGVKESGFGREGSRYGMDEYLNMKLICTAV
SSA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgaacaggcccgatctgttgcggcatcaggcgcatatcgacggaatctggata
tccggggaccggaagctgactgtcgaggacccggcgaccggcgcggcgctcggaaccgtg
cccgatctgggcacttcccacgcggaatgggccgtcgtttccgcgcaggccgcgctggtc
ggctggcgcgcgaagacggcgagtgagcgcggtgccgttctgcggcgctgggcggacctg
atgctcgcccatcgcgaggacctcgcccgcatcatgacgcatgagcagggcaagccgctt
gcagaggcgcggggcgaggtggcctatgccgcgtccttcctcacctggtttggcgaggaa
gcgcggcgcacttatggcgatgtgatcccgggtcatggcaccgacaagcgcctgatggtc
acccgagagccgatcggcgtcgtcgcggcgatcacgccctggaatttcccgctcgccatg
atcacccgcaaggcggggccggcgctggcagccggttgcacgatggtcgtcaagccctcg
gaactgacgcctttctcggcgcttgcgttggcattgctcggcgaggaagccgggataccg
gcaggcgccctcaacatcgtgaccggatcgccacgcgagatcgggaacgtgcttgtctct
catccagccatcgcgaagctcagctttaccgggtcgacggcggtcggcaagatgctcgcc
gcgcgatgcatggagacagtcaagcgcgtgtcgctcgagttgggtggcaatgcgccgttc
gtcgtgttcgacgatgcggatctcgatgcggctgtcgagggtgcgatcgcatccaagttt
cgcaatgcgggccagacttgtgtctgcgcaaaccgtttcatcgtccagacgggcatttac
gaccggttcgtcgccgccctcaaggaaagggttcaggcgctccgcgtcggcaacgggctg
gacgagggcatcgaaacgggtccgctaatcaatggagccgccatcgacaaggtgcgcagc
catgttgcggacgcgcttcggcagggcggcaagctgctggccgggggcgaggcgatcgag
ggggcagggcatttcttccagccgacgctcatcagcgacgtgtccgccacggcgcgcctg
tgcgtcgaggagacattcggtccgctcgcgggcgtcgtgcgcttcaacacggaagccgag
gcgatcgcgctggccaatgacacgcgggccggtctggcagcctatctctatacacgcgac
ctctcgcgcagctatcgcgtcagcgaagcactgcaatatgggatggtgggcctcaacacg
ggcctcatctcgacagaggtggcgccgttcgggggtgtgaaggagtccggcttcggtcgc
gaggggtcgcgctatggcatggacgaatatctcaacatgaagctgatctgcacggcggtt
tcctcggcctga
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