Saccharothrix syringae: EKG83_30410
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Entry
EKG83_30410 CDS
T06258
Name
(GenBank) AfsR/SARP family transcriptional regulator
Organism
ssyi
Saccharothrix syringae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTAD
TPR_12
TPR_2
TPR_1
NB-ARC
TPR_10
TPR_7
Trans_reg_C
AAA_16
TPR_16
DUF3856
AAA_22
AAA_25
SNAP
TPR_11
AAA
TPR_14
Motif
Other DBs
NCBI-ProteinID:
QFZ21127
UniProt:
A0A5Q0H4E6
LinkDB
All DBs
Position
complement(7187844..7190873)
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AA seq
1009 aa
AA seq
DB search
MRIGILGPVELGEEGRPVPVAGPQLRCVLAVLASEAGRAVPLPRLVEALWEVPPPAARGT
VQVYASRLRKLLSGSGIALVSAGGGYRLDVDPADVDVHRFRDAVRRAREAPDVALRRQLL
AGALAEWRGPAFADAAGGPLRDRVVVALAEERLAALEERLEADLELGRHHDVVGELAALA
AEHPGRERLTAALMLALHRCGRRVEALEVYRRLRALLVERAGVEPGPRLRHLHQVILADD
GTAAPAAREVPRQLPAPVRDLTARDGHLAALDGLLAASGGQPLVVALVGTPGVGKTALAL
GWAHRVAARFPDGQLHADLRGHGPDEPVAPEVVLGGFLRALGVHPGQVPETGAERSALCR
SLLSGRRVLVVLDDARSAEQVRPLLPGTAGCAVVVTSRVELAGLATRDSAHLVTVGPLAA
DDGLALLRRVVGARVDAEPVAAARLVGLCAGLPLALRVVAHRALRRPSVPLAALADQLAD
RARRMDLLSPPDDPTAAVRGVFSWSYRALPPAAAALFRALAVLPGTDFGAGAAAAAADDP
DVAGALEVLVAGHLVEETALDRYRLHDLLRAYAAELAGQSGPAGQTGPAESAGQTEPTGL
SGPTRPTGPDERHAAAIRVLDWYLAHAEAAVALVETETDDLGGVFADRDAAAAWLAAERA
NLVAVVRFAAAVGAHEHAWRLPAALWRHWFTLGLVDDLTAAVEVGLASARTRRDPRAQGD
LLNILGTAHYTAHRYDTALEVYEQALVLREALGDRVGTVRTLTNTAVVHYLAGRYRDAVE
QGERVLARWRDLDDAFGEAMAHTALGGFHLRLGRADLALEHGRRALALFEKLGHRFGQAA
SVLNLGHVHRHADEPDRAAEHYRDALERFRELGDPRHEGEARCGLGAVERGRGRFDRAAD
HLDAAAALGAVVDDAALRCEVALETGLLRLAQGRPEPARAHFEQARRLGDPYQRACALHG
LARAGCAAGGHGADAWRAAAGEFAALGVPDRVAPGCERCSAAVQRAVCT
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcgggatcctggggccggtcgagctgggcgaggagggccggccggtgccggtg
gccggaccgcagttgcgctgcgtcctggcggtgctggcgtccgaggccggccgtgccgtg
ccgctgccgcggctggtcgaggcgctgtgggaggtgccgccacccgccgcccggggcacc
gtccaggtctacgcgtcccggttgcgcaagctgctcagcggctccggcatcgcgctggtc
agcgcgggcggcgggtaccggttggacgtcgacccggccgacgtcgacgtgcaccggttc
cgggacgcggtccggcgggcgcgggaggctccggacgtcgcgctgcggcggcagttgctg
gcgggcgccctggccgagtggcgcgggccggcgttcgcggacgccgccggcgggccgttg
cgcgaccgggtggtcgtcgcgctggccgaggagcggctggcggccctggaggagcggctg
gaggccgacctggagctggggcggcaccacgacgtggtgggcgagctggccgcgctggcg
gctgagcaccccgggcgggagcggttgaccgccgcgctgatgctcgcgctgcaccggtgc
gggcggcgggtggaggcgctggaggtctaccggcggctgcgggcgctgctggtggagcgg
gccggggtggagccggggccccggctgcggcacctgcaccaggtgatcctggccgacgac
ggcaccgcggcgcccgcggcgcgggaggtgccccgccagttacccgcgcccgtccgggac
ctcaccgcgcgggacggccacctggccgcgctggacggcctgctcgccgcctcgggcggg
caaccgctggtggtggccctggtcgggacgccgggggtgggcaagacggcgctggcgctg
ggctgggcgcaccgggtggcggcgcggttcccggacgggcagctccacgccgacctgcgc
gggcacgggccggacgagccggtggcgcccgaggtcgtgctgggcgggttcctgcgggcg
ttgggcgtgcaccccgggcaggtgccggagaccggggcggagcggtcggcgctgtgccgg
tcgctgctgtcgggccgccgggtgctggtggtgctggacgacgcgcggtcggccgagcag
gtgcggcccctgctgccgggcacggcgggctgcgcggtggtggtgaccagccgggtcgag
ctggccgggctggcgacgcgggacagcgcgcacctggtcacggtgggcccgctggcggcc
gacgacgggctggcgctgctgcggcgcgtggtgggcgcgcgggtcgacgccgagccggtc
gcggcggcgcggctggtcgggctgtgcgcggggctgccgctggcgctgcgggtggtggcg
caccgggcgctgcggcggccgtcggtgccgctggccgcgctggccgaccaactcgccgac
cgggcgcggcgcatggacctgctgtcgccgcccgacgacccgaccgcggcggtgcgcggg
gtgttctcgtggtcctaccgggcgctcccgccggccgcggcggcgttgttccgcgccctc
gccgtcctgcccgggaccgacttcggtgctggcgcggcggccgcggccgccgacgacccg
gatgtcgccggtgcgctggaagtgctcgtcgcgggccacctggtggaggagaccgcgctg
gaccggtaccggctgcacgacctgctgcgcgcctacgccgccgagctggccgggcagagc
gggccggccgggcagaccggcccggctgagtcggccgggcagaccgagccgaccgggctg
tccggcccgacccggccgaccgggccggacgagcggcacgcggcggcgatccgcgtgctg
gactggtacctggcgcacgcggaggcggcggtcgcgctggtggagaccgagaccgacgac
ctgggcggggtgttcgccgaccgggacgcggcggcggcctggctggccgcggagcgggcg
aacctcgtggccgtcgtccggttcgcggccgcggtcggcgcgcacgagcacgcctggcgg
ctgcccgccgcgctgtggcggcactggttcacgctcggcctggtcgacgacctgaccgcc
gcggtggaggtcgggctggcgtccgcgcgcacccggcgcgacccgcgcgcgcagggcgac
ctgctcaacatcctgggcacggcccactacacggcccaccggtacgacacggcgctggag
gtctacgagcaggcgctggtgctgcgcgaggcgttgggcgaccgggtcggcacggtgcgg
acgctgaccaacaccgccgtggtccactacctggccggccgctaccgggacgccgtcgag
cagggcgaacgcgtgctggcgcggtggcgcgacctggacgacgcgttcggcgaggccatg
gcgcacaccgcgctgggcggcttccacctgcggctgggccgcgcggacctggcgctggag
cacgggcggcgggcgctggcgctgttcgagaagctggggcaccggttcgggcaggccgcc
tcggtgctcaacctgggccacgtgcaccggcacgcggacgagccggaccgcgccgccgag
cactaccgggacgcgctggagcggttccgcgagctgggcgacccgcggcacgagggcgag
gcgcggtgcggcctgggcgcggtggagcgcgggcgcgggcggttcgaccgggccgccgac
cacctcgacgcggcggccgcgctcggcgccgtggtggacgacgcggcgctgcgctgcgag
gtggcgctggagacgggcctgctccggctggcgcaggggcgccccgaaccggcgcgggcg
cacttcgagcaggcccgccgcctcggcgacccctaccagcgcgcgtgcgccctgcacggc
ctggcccgcgccgggtgcgcggcgggcgggcacggggcggacgcgtggcgggcggcggcg
ggcgagttcgccgcgttgggggtgcccgaccgggtcgcgccggggtgcgagcgctgttca
gcggccgttcagcgggctgtctgcacctga
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