Spiroplasma syrphidicola: SSYRP_v1c00030
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Entry
SSYRP_v1c00030 CDS
T02677
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ssyr
Spiroplasma syrphidicola
Brite
KEGG Orthology (KO) [BR:
ssyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssyr03032
]
SSYRP_v1c00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
ssyr03400
]
SSYRP_v1c00030 (gyrB)
Enzymes [BR:
ssyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SSYRP_v1c00030 (gyrB)
DNA replication proteins [BR:
ssyr03032
]
Prokaryotic type
DNA Topoisomerases
SSYRP_v1c00030 (gyrB)
DNA repair and recombination proteins [BR:
ssyr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SSYRP_v1c00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
TOPRIM_C
HATPase_c_3
Motif
Other DBs
NCBI-GeneID:
16152757
NCBI-ProteinID:
AGM25599
UniProt:
R4UCH8
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All DBs
Position
3022..4944
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AA seq
640 aa
AA seq
DB search
MKETYNSNSIQVLEGLEAVRKRPGMYIGATNVRGLHHLVWEIIDNSIDEALAGYCNKIEI
IINEDESITVKDNGRGIPTGIHSKTKVSTLETVFTVLHAGGKFDSDTYKISGGLHGVGAS
VVNALSKYLKVEVNREGEKYLMEFHNGGKILSPIQKVGTTNEQGTIVTFKPDSEIFKETT
IFNFSTIEKRIKQLAFLNKGLHISLLDHRDEENTFVEYNFKNGIKDYVSELNKTIGLPLN
DIFYVEGTEENIMVEFGLQYNDSYTENFFSFCNNINTHEGGTHEEGTKLALVRELNNYIK
NNNKGNKNSNEEKYTWDDIKEGLTVIISVRHPDPQYEGQTKTKLGNSEVKKIVSNIVGKG
LASFLLENPEDSKNIFEKIALSLKARIAAQRAKESTRRKNAMESFSLPGKLSDCETKNAE
IAELYIVEGNSAGGSAKAGRDRKFQAILPLKGKILNVEKASQLKVFENNEINSIITALGA
GIKEEFNGKKLRYHKVIIMTDADVDGSHIRILLLTFFYRYMKDLIENGNVYIAQPPLYKI
QNGNNVKYAYSDFELGEYKEELKTKKINNFTIQRYKGLGEMNPEQLWETTMDPTNRVLLK
VSVNDAFDANLICTELMGENVEPRKKFIKENAKYVKNLDI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaacttataattccaattcaattcaagttttagaaggattagaagctgttcgt
aaacgtccagggatgtatattggggcaactaatgttcgtggtttacatcatttagtttgg
gaaattattgataattcaattgatgaagcgttagctggttattgtaataaaatcgaaatt
attattaatgaggatgaatcaattacagtaaaagataatggtcgaggaattccaactggt
attcatagtaaaacaaaagtttcaacgttagaaacagtttttacagttttacatgctggg
ggaaaatttgattctgatacatataaaatttctggggggttacatggagttggagctagt
gttgttaatgccttaagtaaatatttaaaagttgaagttaatcgtgaaggtgaaaagtat
ttaatggaattccacaatggaggaaaaatcttatcaccaattcaaaaagtcggaacaaca
aatgaacagggaacaattgtaacttttaaacctgattctgaaatttttaaagaaacaaca
atttttaatttttcaacaattgaaaaacgaattaaacaattagcttttttaaataaaggg
ttacatatttccttattagatcatcgcgatgaagaaaatacttttgttgaatataatttt
aaaaatgggattaaagattatgtttcagaattaaataaaacaattggtttacctctaaat
gatattttttatgttgaaggaactgaagaaaacattatggttgaatttggtttacaatat
aatgatagttatacggaaaactttttttccttttgtaataatatcaatacccatgaaggg
ggaactcatgaagagggaacaaaactagcgttagttcgtgaattaaataattatattaaa
aataataataagggtaataaaaatagcaatgaggaaaaatatacgtgagatgatattaaa
gaaggtttaacggttattatttctgttcgtcaccctgatccacagtatgaaggacaaaca
aaaacaaagttaggtaatagtgaagttaaaaaaatagtttctaatattgttggaaaaggt
ttagcaagttttctattagaaaatcctgaagatagtaaaaatatttttgaaaaaattgcc
ttatcgttaaaagcacggattgcggcacaacgagcaaaagaatcaacccgtcgtaaaaat
gcaatggagagtttttcattaccagggaaattatcagattgtgagacaaaaaatgctgaa
attgctgaattatatattgttgagggaaattcagcgggtggtagtgctaaagctggacgt
gatcgtaagtttcaagcgattttacccctaaagggaaaaattttaaatgttgaaaaagct
agtcaattaaaagtatttgaaaataatgaaattaattcaattattacagctttaggtgct
ggaattaaagaagaatttaatggtaaaaaattgcgttatcataaagtaattattatgacc
gatgctgatgttgatggttcccatattcggattttattattaacattcttttatcgttat
atgaaagatttgattgagaatggcaatgtctatattgctcaaccaccattatataaaatc
caaaatggtaataatgtcaaatatgcttactcagattttgaattgggagaatataaagaa
gaattaaaaactaaaaaaataaataattttacaattcaacgttacaaaggattaggagaa
atgaatcctgaacaattatgagaaacaacaatggatccaactaaccgggtattgttaaaa
gtttcagtcaatgatgcttttgatgctaatttaatttgtacagaattaatgggtgaaaat
gttgaaccacgtaaaaaatttattaaagaaaatgccaaatatgttaaaaatttagatatt
taa
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