Serratia symbiotica: SCc_139
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Entry
SCc_139 CDS
T01672
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ssz
Serratia symbiotica
Pathway
ssz00470
D-Amino acid metabolism
ssz00550
Peptidoglycan biosynthesis
ssz01100
Metabolic pathways
ssz01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ssz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SCc_139 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SCc_139 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SCc_139 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssz01011
]
SCc_139 (ddlB)
Enzymes [BR:
ssz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SCc_139 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ssz01011
]
Precursor biosynthesis
Amino acid ligase
SCc_139 (ddlB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
RimK
TTL
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
AEW44320
LinkDB
All DBs
Position
247098..248018
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AA seq
306 aa
AA seq
DB search
MTEKVAVLLGGVSTEYKISLQSGAAVLAGLREVGINAHGINPWEFPVIKLKAQGFSKVFI
SLHGRGGEDGTIQGLLEFLELPYTGSGVMASALSMDKWRSKMLWQSMGLPVVPYVTINYK
QYACAEKIVLLERLARLGFPLMVKPNREGSSIGISKVNINNELEVALQKAFRYDNEVILE
RWLSGPEYTVSILGDQVLPSIRIYPTRMFYDYEAKYGTDNTKYYCPSGLSKEKEDEITSL
ALYAYRALDCRGWGRVDIIQDSNSCFYLLEVNTSPGMTNNSLVPIAARQFGLSFSQLVIK
ILSLAE
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagaaagttgccgtcctattgggaggtgtttctactgaatataaaatatcactg
caatccggtgctgctgtattagcaggattaagagaagttggtatcaacgctcatggaatt
aatccgtgggagttccctgtaattaaattaaaagcgcagggatttagtaaagtgtttatt
tcgttacacggtcgtggtggcgaggatgggactatacagggtttattggaattcctagaa
ttgccttataccggtagtggtgtaatggcctcagcactaagcatggataaatggcgcagc
aaaatgttatggcagtcaatgggattgccagtagtgccttatgtaacgataaattataag
cagtatgcttgtgctgaaaaaatagtgctgctagagcgtctggctagactaggatttcct
ttaatggttaaacctaatcgtgaaggatctagtattggtataagtaaagtgaatataaat
aatgaacttgaggtagctctgcaaaaagctttccgttatgacaatgaagtaatattagaa
aggtggctaagtggcccagaatataccgtatcaatattaggtgatcaagttttaccctct
attcgtatttatcctacaaggatgttttacgattacgaggctaagtatggtacggataat
accaagtattactgcccaagtggtttgagtaaagaaaaagaagacgagattacgtcattg
gcgctatatgcttatcgagcactggattgtcgtggctgggggcgtgtagatataatacag
gatagcaatagttgtttttatttgcttgaggtaaatacgtctccaggtatgactaataat
agtttagtgccaatagcggcacgtcagtttggacttagtttttctcaactagtaataaaa
attttatcgttggccgagtag
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