Sphingomonas taxi: MC45_16320 Help Entry MC45_16320        CDS       T03398                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism stax  Sphingomonas taxi Pathway stax03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:stax00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     MC45_16320  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:stax03400]     MC45_16320 Enzymes [BR:stax01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      MC45_16320 DNA repair and recombination proteins [BR:stax03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      MC45_16320 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_C DNA_ligase_A_M DNA_primase_S RNA_ligase Motif Other DBs NCBI-ProteinID:  AIT07675 UniProt:  A0A097EJC6 LinkDB All DBs Position complement(3566217..3568682) Genome browser AA seq 821 aa AA seqDB search MPDPLERYNAKRDFAKTAEPAGTLEPGHGNGFMVQKHDATRLHWDFRLEVDGVLKSWAVT RGPSLDPDEKRLAVRTEDHPLSYATFEGTIPKGEYGGGTVMLWDRGTWAPVAGKSAKDID KGHLHFTLDGERMKGEWLLIRLKPRAKEKRENWLLRKLDDAYAGGTDTLVEEALTSVDTG RTMAEIAEGKPARKTAPAKAAKPAKAVKPAKRRAAKPQAMPAFREPQLCTLVDAVPAGAG WLHEVKYDGYRALVAVAGGEAKVFTRSGLDWTDKFAAIAEAAAALPVDSALIDGEIVAFK DGRPDFSTLKDAISAGGDMTLFAFDLLELDGEDLTALTTVERKDRLRAMLTDGPRLQFAE HVLGSGEALFEAMCKEGLEGVVSKRADAPYAGKRNRTWLKAKCTRRQEFVIIGWTPSDKK RGFKSLLLGLHEDGGFRYAGKVGTGFDQAMMDDLAERLAGLAVKTPPVDAESLKPFKAAL RGARWVKPELVAEIAFAEVTPDKVLRHSSFLGLRGDKAAADVVAEVAEPAPAAPEVHIKV SSRDRVIFPESDVTKGELADYYAHLSPIMLPWAGRRPVSLVRCPQGRAKQCFFQKHDAGS FGDTVHHVDVKEKDGSVQPYLYVDDADGLVACVQMGTIEFHGWGSRIDDLEKPDRLVIDL DPDEGLDFADTKRAAEHVSAQLAELGLVSFPLLSGGKGVHVVVPLTPQAAWPAVKDFADR FARALAAAEPDRYVAVMTKAKRKGKIFIDYLRNQRGSTAIMPYSTRARAGAPVAAPVSWT ELRDIDTAARWGVRDAEELLQRATSRALAGWGVAEQVLPDL NT seq 2466 nt NT seq  +upstreamnt  +downstreamnt gtgcctgatccgctcgaacgctataacgccaagcgcgacttcgcgaagactgccgagccg gcggggacgctggaacccggccatggcaacggcttcatggtgcagaagcatgatgcgacg cggctgcactgggacttccggcttgaggtggacggggtgctcaagagctgggcggtgacg cgcgggccgagcctcgatcccgacgagaaacggctggcggtgcgcaccgaggaccatcct ttgtcctatgcgacgttcgaggggacgatccccaaaggcgaatatggcggcggcacggtg atgctgtgggatcgcggcacctgggcgccggtggcgggcaaatcggccaaggatatcgac aaggggcatctccacttcacgctcgacggcgagcggatgaagggcgaatggctgctgatc cggctgaagccgcgcgccaaggaaaagcgcgagaactggctgctgcgcaagctcgacgac gcttatgccggcggcaccgacacgctggtcgaggaggcgctgaccagcgtcgatacgggc cggacgatggcggagatcgccgagggcaagccggcgcgcaagaccgcgcccgccaaggcg gcgaaacccgcgaaagccgtcaaacctgcgaagcgccgcgccgccaagccgcaggcgatg cccgcctttcgcgaaccgcagctttgcaccctggtcgacgccgtccccgcgggcgccggc tggctgcacgaggtgaaatatgacggctatcgcgcgctggtcgcggtcgccgggggcgag gcaaaggtcttcacgcgcagcggactcgactggaccgacaaattcgccgcgatcgccgag gcggccgctgcgctgcccgtcgacagcgcgctgatcgatggcgagatcgtcgcgttcaag gacgggcggcccgatttctcgacgctcaaggacgccatttcggccggcggcgacatgacg ctgttcgccttcgacctgctcgaactggacggcgaggacctgacggcgctgaccaccgtc gagcgcaaggaccggctgcgtgcgatgctgaccgacgggccgcgcctccagttcgccgag cacgtgctcggctcgggcgaggcgctgttcgaggcgatgtgcaaggaggggctggagggc gtcgtctcgaaacgcgccgacgcgccttatgccggcaagcgcaaccggacgtggctcaag gcgaaatgcacgcggcggcaggagttcgtcatcatcggctggacgccgtcggacaagaag cgcggcttcaagtcgctgctgctcggcctgcacgaggatggcggctttcgctatgccggc aaggtcggcaccggcttcgatcaggcgatgatggatgacctcgcggagcggctggcgggg cttgcggtcaagacgccgccggtcgatgcggagagcctcaagccgttcaaggcggcgctg cgcggcgccagatgggtgaagcccgaactcgtcgccgaaatcgctttcgccgaggtgacg cccgacaaggtgctccgtcattcgagcttcctcggcctgcgcggcgacaaggcggcggcg gacgtggtggcggaggtcgccgaacccgcacctgcggcgcccgaggtgcatatcaaggtc agcagccgcgaccgcgtgatctttccggagagcgacgtcaccaagggcgagctcgccgat tattatgcgcacctctcgccgatcatgctgccctgggcggggcggcggccggtcagtctg gtgcgctgtccgcaggggcgggccaagcaatgcttcttccagaagcatgacgcgggcagc ttcggcgacacggtgcatcatgtcgacgtcaaggagaaggacggctcggtgcagccctat ctctatgtcgacgatgccgacgggctggtcgcctgcgtgcagatggggacgatcgaattc cacggctggggatcgcggatcgacgatctggagaagcccgaccggctggtgatcgacctc gaccccgacgaggggctcgacttcgccgacaccaagcgcgcggcggagcatgtcagcgcg cagctcgccgaactggggctggtcagctttccgttattgtcgggcggcaagggtgtgcac gtcgtcgtgccgctgacgccgcaggcggcatggccggcggtgaaggactttgcggatcgc ttcgcgcgggcgttggcggcggccgagcccgaccgctacgtcgcggtgatgaccaaggcg aagcgcaaggggaagatcttcatcgactacctgcgcaaccagcgcggcagcaccgcgatc atgccctattcgacgcgtgcgcgggccggcgcgccggtcgcggcgccggtgtcgtggacc gagctgcgcgatatcgacaccgcggcgcgctggggcgtgcgcgatgccgaggaactgttg cagcgcgcgacgtcgcgggcgctggcgggctggggcgtggcggagcaggtgttgccggat ttgtga

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