Stenotrophomonas sp. 169: ICJ04_18055
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Entry
ICJ04_18055 CDS
T08645
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
steq
Stenotrophomonas sp. 169
Pathway
steq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
steq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ICJ04_18055 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
steq03400
]
ICJ04_18055 (recD)
Enzymes [BR:
steq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ICJ04_18055 (recD)
DNA repair and recombination proteins [BR:
steq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ICJ04_18055 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
AAA_11
UvrD_C_2
UvrD-helicase
Helicase_RecD
AAA_22
SH3_13
UvrD_C
Herpes_Helicase
nSTAND3
SLFN-g3_helicase
AAA_28
T2SSE
DEAD
RecD_N
AAA_16
AAA_29
Mg_chelatase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QNR97331
UniProt:
A0A7H1ALQ9
LinkDB
All DBs
Position
complement(4125225..4127072)
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AA seq
615 aa
AA seq
DB search
MNLLTALKQSGQLRTLDHALALSLGRLRADTPQAVLVAAALASLAVSQGHAGFDPAQPQR
LVEGDFTWPLAADWADQLRASPWVATPATADAVSDDAPLVLENGLLYLRRYREYERTLAE
GLQRIGRFSLPDAGLEPLAPLFAQLFPHAAERADQQARAAAVTLRHPLALVTGGPGTGKT
TTIARLLLLLIAQAAQAGRAVPRMALAAPTGRAAERMAESLRLAMQRLQGEGIEAVLCEG
LPSSGTTLHRLLGVIPDSPRFRHHADNPLPFDVVVVDEASMIDLPLMAKLVEAISEGTRL
ILLGDPDQLPSVEAGDVLSAILRASGDGQGTRADDARALKPLLAPASLLPEAPPSAFAGR
RVQLQRGYRQTATLDLAPLATAVRRGDSDGALRLLRDQSLAGVGFHEDVLDPLSVQREHL
LGHWQALGETADPAQALAQASRLRVLTALREGPQGARGLNHRIETLLAGANAGYFHGRLL
LVTENSYRHRLFNGDIGICLRDATGAIVAWFAGDDLAQPRAFHPAALPAHESAFAMTVHK
AQGSEFDEVWLQLPRHDARVLSRELVYTGLTRARQRLHLAGPADVLEKALHRHASRMSGL
AWRLGAEPVQASLFG
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgctgaccgcattgaagcagagtggccagctgcgcaccttggaccatgccctg
gcgctcagcctggggcgtctgcgtgcggatactccgcaggcggtgctggtggccgctgcg
ctggcctcactggcggtatcgcagggccacgccggtttcgatccggcgcagccacagcgg
ctggtggaaggcgatttcacctggcccctggcggcggactgggcggaccagctgcgcgcc
tcgccttgggtggccacgccggccacggcggatgcggtcagtgatgacgcaccgctggtg
ctggaaaacgggttgctgtatctgcgccgctaccgcgaatacgaacgcacgctggccgag
gggctgcaacggatagggcgtttctccctgcctgacgcaggccttgaaccgctcgcgccg
ttgttcgcgcagttgtttccacacgctgcagaacgcgcggaccagcaggcacgcgcggcg
gcggtgacgctgcgtcaccccctcgctctggtgaccggtggcccaggcacgggcaagacc
accaccatcgcccgcctgctgttgctgctgatcgcgcaggcggcccaggcaggccgcgcc
gtcccccggatggcattggcggccccgaccgggcgcgccgccgagcgcatggcggaaagc
ctgcggctggcgatgcagcggttgcagggcgagggcatcgaggctgtgctgtgcgagggc
ctgcccagcagtggaaccacgctgcaccgcctgctgggggtgattccggattcgccgcgg
ttccgccaccatgcggacaatcccctgccattcgatgtggtggtggtggacgaggcctcc
atgatcgacctgccgctgatggccaagctggtggaggcgatcagcgagggcacgcggctg
atcctgctgggtgacccggaccagcttccgtcggtggaggctggcgatgtgctcagcgcc
atcctgcgtgccagcggcgacgggcagggcacgcgtgccgatgacgcacgcgcgctgaag
ccgctgctggcaccggcatcgttgctgcccgaggcgccacccagcgccttcgccggccgc
cgggtgcagctgcagcggggctaccggcagacagccaccctggaccttgcgccgttggct
accgcggtgcgtcgcggtgacagcgacggcgcgctgcgcttgttgcgggatcagtcactg
gcaggcgtcggcttccacgaagatgtgctggacccgttgtcggtgcagcgcgagcatctg
ctcgggcactggcaggccttgggcgagacggcagatcccgcgcaggcactggcgcaggcg
agccgcctgcgcgtgctgacggcactgcgcgagggcccgcagggcgcgcgcggcctgaac
catcgcattgaaacgctgctggccggtgccaatgcaggctacttccacggcagattgctg
ctggtgactgaaaacagctaccgccatcgtctgttcaacggtgatatcggcatctgcctg
cgcgacgcaacgggcgcgatcgtggcctggtttgcaggcgatgacctggcccagccgcgt
gcattccacccggccgcattgcctgcccatgaaagtgcgttcgcaatgaccgtgcacaag
gcgcagggctcggaattcgacgaagtgtggctgcagcttccgcggcacgatgcacgcgta
ctgtcgcgggaactggtctacaccgggctgacccgcgcgcggcagcggttgcacctggcc
ggtccggccgatgtgctggaaaaagccctgcaccgccacgccagccggatgtccgggctg
gcgtggcgcctgggcgccgaaccggtgcaggcctcgctgttcggctga
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