KEGG   Symbiobacterium thermophilum: STH1795Help
Entry
STH1795           CDS       T00196                                 

Definition
(GenBank) conserved hypothetical protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
sth  Symbiobacterium thermophilum
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sth00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    STH1795
Enzymes [BR:sth01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     STH1795
DNA repair and recombination proteins [BR:sth03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     STH1795
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(1938517..1939440)
Genome map
AA seq 307 aa AA seqDB search
MARTERRWVRVGGRELAVTNLEKPMWPADGLTKGDLISHYVSVAPYLLPYLRGRPVVLTR
YPHGVGGKWFYQKDAPQGLPDWIPTWADRAEDGRVIRYLRIEEPAALAYVANLGAIELHP
WLSSCDSPDHPDWAVIDLDPAEGATFADVLVVARLVRQILGEVQVQGFPKLSGATGVHIF
CPAAPGTTYAETAAFCEQVGRILLRAYPEKVTLERAVARRGPKVYVDYLQNRRGQTITSV
YGLRPLPGAPVSAPVTWEELEGEPPRITMRTLPARLAAVGDLFAPMLQATQDLQAATERL
RRYLTGV
NT seq 924 nt NT seq  +upstreamnt  +downstreamnt
gtggccagaaccgagaggcggtgggtacgggtcggcgggcgggagctggcggtgaccaac
ctggagaagcccatgtggccggccgacgggctgaccaagggggacctgatctcccactac
gtgtccgtggctccctacctgctgccgtacctgcgggggcggccggtggtgctcacccgt
tacccccacggagtcgggggcaagtggttttaccagaaggacgccccgcaggggctcccg
gactggattccgacctgggcggaccgggcggaggacggccgcgtcatccgctacctgcgc
atcgaggagccggcggcgctggcgtacgtggccaatctgggagccatcgaacttcacccg
tggctctcgtcctgcgactcgccggaccacccggactgggcggtcatcgacctcgacccg
gcggaaggcgccaccttcgcagacgtgctggtcgtcgcccggctggtccggcagatcctg
ggcgaggtgcaggtgcagggtttccccaagctgtcgggggccaccggcgtccacatcttc
tgtcccgcggcgccgggcacgacctacgccgagacggccgcgttctgcgagcaggtgggc
cggatcctgctgcgagcgtatccggagaaggtgacgctcgagcgcgcggtcgcacggcgc
ggaccgaaggtgtacgtggattacctgcagaaccggcgcgggcagacgatcaccagtgtg
tacggactgcggccgctgcccggggcgccggtgtccgcgccggtcacgtgggaggagctg
gagggcgagccgccgcggatcacgatgcgcaccctgcccgcgcgcctggccgcggtgggc
gacctgttcgcgccgatgctgcaggccacccaggacctgcaggcggccacggagcggctc
aggaggtatctcacaggtgtgtga

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