Symbiobacterium thermophilum: STH239 Help Entry STH239            CDS       T00196                                  Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism sth  Symbiobacterium thermophilum Pathway sth02020   Two-component system sth02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:sth00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     STH239  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     STH239  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:sth03021]     STH239 Transcription machinery [BR:sth03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      STH239 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_Crp_2 HTH_23 Sigma70_r4 HTH_IclR HTH_38 HTH_3 HTH_31 LacI Phage_CII K-cyclin_vir_C HTH_Tnp_ISL3 Xre-like-HTH Motif Other DBs NCBI-ProteinID:  BAD39224 UniProt:  Q67SW9 LinkDB All DBs Position 265955..267313 Genome browser AA seq 452 aa AA seqDB search MRLGFELRMQQTQRLVMTPELRQAITVLQKPVAELSELIAGELLENPCLEVEPREPSEDG APSEVGRLLDFLNRGGSHGAGAPPEREEDTSFEPFTPRMPTLAEHLHSQLGLLRLDRAQE RIARFLIGCIDDHGYLAVSLGEAAAQLGATEEQVEAALKVIQSLDPPGVGARSLQECLLI QWATLDDPNPLVPELIRHHLQDLAAGRIPRIAERLGVDCAAVQAAADAIRNLDPKPGRRF GGGDEARYVVPDVFIERVGQEYVVMVNEAPLPRLSVSTHYRRLLDAADGHTRRYVEERIQ SALWLIRSIEQRRLTLLRVTEAIVRFQREFFDRGPRHLRPLTLREVAQAVGVHESTVSRA TSGKWAQTPQGMFELKYFFSSGVETGHGEGVAAEAVKRMIADLIRQEDPARPLSDQALAE ALAAQGLRIARRTVAKYREEMGLPNSGQRRRY NT seq 1359 nt NT seq  +upstreamnt  +downstreamnt atgcgtctcggctttgagcttcggatgcagcagacccagcgcctggtgatgacgcccgag ttgcgccaggcgatcaccgtcctgcagaagccggttgcagagctgagcgagctgatcgcc ggcgaactcctggagaatccctgcctggaggtggagcccagggagccgtctgaggatggc gcgccctccgaggtcggccgcctgctggatttcctgaaccgcgggggatcccacggggcc ggcgcgcctcctgagcgggaggaggacacatctttcgagccgtttacgcccaggatgccc accctggccgagcacctgcacagccagctggggctccttcggctcgaccgggcgcaggag cgcatcgcccgcttcctcattggctgcatcgacgaccacggttacctggcggtatccctg ggggaggccgccgcgcaactgggcgcgaccgaagagcaggtggaggcggcactgaaggtc atccagtcgctggacccgccgggggtcggcgcccggtcgctgcaggagtgcctgctgatc cagtgggcgacgctggacgacccgaatccgctggtgccggagctcatccgccaccacctg caggatctggccgcaggacgcatcccgcgcatcgccgagcggctcggagtggactgcgcc gcggtgcaggcggccgcagacgccatccgcaacctcgatcccaagcccggccggcgcttc ggcggcggggacgaggcccggtacgtcgtgccggacgtgttcatcgagcgggtcggccag gagtacgtggtgatggtcaacgaggcgccgttgcccaggctgtcggtgtccacccattac cgccggctgctcgacgcggctgacggtcacacgcgccgctatgtggaggagcggatccag tcggccctgtggctcatccggtccatcgagcagcgccggctgacgctgctccgggtgacc gaggcgatcgtgcggttccagcgggagttcttcgaccgcggcccccgccacctgcggccc ctgacgctgcgggaggtggcgcaggccgtcggcgtgcacgagtcgaccgtcagccgggcg accagcggcaagtgggcccagacgccccagggcatgttcgagttgaagtacttcttctcc agcggcgtggagacgggccacggggagggagtcgcggccgaggcggtgaagcggatgatc gcggacctgatccggcaggaggatccggcccggccgctgtccgaccaggcgctggcggag gcgctcgcggcgcaggggctgcggatcgcccgccgcaccgtcgccaagtaccgggaggag atgggcctgcccaactccggccagcgtcggcgttattga

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