Caldimonas thermodepolymerans: IS481_06265
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Entry
IS481_06265 CDS
T06911
Symbol
lapB
Name
(GenBank) lipopolysaccharide assembly protein LapB
KO
K19804
lipopolysaccharide assembly protein B
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
IS481_06265 (lapB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_16
TPR_14
Rubredoxin_2
TPR_2
TPR_1
TPR_7
TPR_11
TPR_17
NatA_aux_su
TPR_12
TPR_19
Motif
Other DBs
NCBI-ProteinID:
QPC32756
LinkDB
All DBs
Position
complement(1305690..1306847)
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AA seq
385 aa
AA seq
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MDFDFQWLLLGLPVAFALGWLASRIDLRQWRSAQRESPRAYFKGLNLLLNEQQDKAIDAF
IEAVQHDPDTTELHFALGNLFRRRGEYERAVRVHEHLLSRGDLPRAERERAQYALAQDFL
KAGLFDRAEAAYQALENTRFRTDAWLALLTLYERSRDWGKAIEVARKLEDAGAGSFSNRI
AHCWCEIALDADARGDAATADEALAKARAAMPQAARPLVIAGQRLARQDRHAEALQVWNE
LITANPGAFALVAREYAASATAARQQAAAIGKLRALYERAPSVELLAALRQLEADPVVRR
DWLGQHLARQPSISAALDLLDETIAQGQPLSPQETQRLQQVLAQSAKPLQRYRCAACGFE
ASHYFWQCPGCQSWDSYPPRRIEDY
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggactttgatttccagtggctgctgctggggctcccggtggccttcgcgctgggctgg
ctggcttcgcgcatcgacctcaggcaatggcgctcggcgcaacgcgagtccccgcgcgcc
tacttcaaggggctgaacctgctgctcaacgagcagcaggacaaggccatcgacgccttc
atcgaggcggtgcagcacgacccggacaccaccgagctgcacttcgcgctgggcaacctg
ttccgccgccgcggtgagtacgagcgcgccgtgcgcgtgcacgagcacctgctcagccgc
ggcgacctgccgcgcgccgagcgcgagcgcgcccagtacgccctggcgcaggatttcctc
aaggccggcctgttcgaccgcgccgaggccgcctaccaggccctggagaacacgcgcttc
cgcaccgacgcgtggctcgccctgctgacgctgtacgagcgctcgcgcgactggggcaag
gccatcgaggtggcgcgcaagctggaagacgccggtgccggctcgttctccaaccgcatc
gcgcactgctggtgcgagatcgcgctggacgccgatgcgcgcggcgacgcggcgaccgcc
gacgaggcactcgccaaggcacgcgccgcgatgccccaggccgcgcgcccgctggtgatc
gccggccagcgcctggcccgccaggaccgccacgccgaggcgctgcaggtgtggaacgag
ctgatcaccgccaacccgggcgccttcgcgctggtggcgcgcgagtacgccgccagcgcc
accgccgcccggcagcaggccgcggcgatcgggaagctgcgcgcgctgtacgagcgcgcg
ccgtcggtggagctgctggccgcgctgcgccagctggaagccgatcccgtcgtgcggcgc
gactggctgggccagcacctggcccggcagccctcgatctcggcggcgctggacctgctg
gacgagaccatcgcgcagggccagcccctctcgccccaggaaacccagcgcctgcagcag
gtgctggcgcagtcggccaagccgctgcagcgctaccgctgcgccgcctgcggcttcgag
gcctcgcactacttctggcagtgccccggctgccagagctgggacagctacccgccgcgc
cgcatcgaggactactga
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