KEGG   Caldimonas thermodepolymerans: IS481_07700
Entry
IS481_07700       CDS       T06911                                 
Name
(GenBank) DotU family type VI secretion system protein
  KO
K11892  type VI secretion system protein ImpK
Organism
sthm  Caldimonas thermodepolymerans
Pathway
sthm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sthm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    IS481_07700
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sthm02044]
    IS481_07700
Secretion system [BR:sthm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   IS481_07700
SSDB
Motif
Pfam: DotU OmpA PIG-P
Other DBs
NCBI-ProteinID: QPC33015
LinkDB
Position
complement(1636391..1637689)
AA seq 432 aa
MSPSQDPFAGFDAGQTFVMPTPGARPTVAAPAGLHGFNREPAQDIAYHPSGFNPLIAAAN
PLLNLIPQMRTITVHQDVAGLRDNLAQGIRQFEQAARAAGIANEKVIAARYILCTVLDET
AASTPWGGSGVWGRHSLLVMFHNEAWGGEKVFQLLTRLAQNPGDNLDLLELIYTCITLGF
EGRYRVIENGRSELQVLRERLAQLIRRQRGNYEPALSQHWAPAVLPKRKWSTAMPLWIFS
AVVGIVLVAGYTGFSYALNRSSDPLFSSITAIKARPMQLPAPVPAQRPRLAQFLAPEIQQ
GLVEVRDFDDRSIVTLRGDGLFAPGSATLAEEREPLMLRIADALNSVQGKVLVTGHTDNV
PIRSARFPSNWHLSQERARSVAALLSRKITQPQRLLAEGRAESEPVAPNDTPANRAKNRR
VEITVFVSQQAG
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgagcccctcccaagaccccttcgccggattcgatgccggacagaccttcgtgatgccc
accccgggcgcgcgcccgacggtggccgcaccggccggactgcacggcttcaaccgtgaa
ccggcgcaggacatcgcctaccacccgagcggcttcaacccgctgatcgccgcggccaac
ccgctgctgaacctgatcccgcagatgcgcacgatcacggtccaccaggacgtggccggg
ctgcgcgacaacctcgcgcagggcatccgccagttcgagcaggcggcgcgcgccgccggc
atcgccaacgagaaggtcatcgccgcgcgctacatcctgtgcacggtgctggacgagacc
gccgccagcaccccctggggcggctcgggcgtgtggggccggcacagcctgctggtgatg
ttccacaacgaggcctggggcggcgagaaggtgttccagctgctgacccggctggcacag
aacccgggcgacaatctcgacctgctggagctgatctacacctgcatcacgctgggtttc
gagggccgctaccgcgtcatcgagaacggccgcagcgaactgcaggtgctgcgcgagcgg
ctggcgcagctgatccgccgccagcgcggcaactacgagccggcgctgtcgcagcactgg
gcccccgcggtgctgcccaagcgcaagtggtcgaccgcgatgccgctgtggatcttctcc
gcggtggtcggcatcgtgctggtggccggctacaccggcttcagctacgcgctcaaccgt
agctccgacccgctgttctcgtcgatcaccgcgatcaaggcacggccgatgcagctgccc
gccccggtgcccgcgcagcggccacggctggcgcagttcctcgcaccggaaatccagcag
gggctggtcgaggtgcgcgacttcgacgaccgcagcatcgtcaccctgcgcggcgacggg
ctgttcgcccctggcagcgcgacgctggccgaggagcgcgagccgctgatgctgcgcatc
gccgatgcactcaactcggtgcagggcaaggtgctggtcaccggccacaccgacaacgtg
ccgatccgctcggcgcgctttccgtccaactggcacctgtcgcaggaacgggccaggtcg
gtcgccgccctgctctcgcgcaagatcacccagccgcagcgcctgctggccgaaggccgg
gccgagagcgagccggtcgcgccgaacgacacgccggccaaccgcgcgaagaaccggcgc
gtcgagatcaccgtgttcgtgagccagcaggccggttga

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